ENST00000340413.7 NUP43
Information
- Transcript ID
- ENST00000340413.7
- Genome
- hg38
- Position
- chr6:149,724,315-149,746,529
- Strand
- -
- CDS length
- 1,143
- Amino acid length
- 381
- Gene symbol
- NUP43
- Gene type
- protein-coding
- Gene description
- nucleoporin 43
- Gene Entrez Gene ID
- 348995
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 149,724,315 | 149,727,198 |
| 7 | 149,731,613 | 149,731,735 |
| 6 | 149,736,471 | 149,736,622 |
| 5 | 149,738,643 | 149,738,778 |
| 4 | 149,742,390 | 149,742,570 |
| 3 | 149,743,638 | 149,743,715 |
| 2 | 149,745,940 | 149,746,062 |
| 1 | 149,746,376 | 149,746,529 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 149,726,969 | 149,727,198 |
| 7 | CDS | 149,731,613 | 149,731,735 |
| 6 | CDS | 149,736,471 | 149,736,622 |
| 5 | CDS | 149,738,643 | 149,738,778 |
| 4 | CDS | 149,742,390 | 149,742,570 |
| 3 | CDS | 149,743,638 | 149,743,715 |
| 2 | CDS | 149,745,940 | 149,746,062 |
| 1 | CDS | 149,746,376 | 149,746,495 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr6 | 150,045,451 | 150,067,665 | Link |
CDS sequence
ATGGAGGAAATTTATGCGAAGTTTGTGTCCCAGAAAATCAGCAAAACCCGCTGGCGACCGCTGCCTCCGGGAAGTTTACAGACCGCGGAGACGTTCGCTACAGGATCTTGGGACAATGAGGAAAATTATATTTCACTGTGGTCTATTGGAGATTTTGGAAACTTGGACTCTGATGGAGGGTTTGAAGGAGACCATCAGTTATTGTGTGATATCAGACACCATGGTGATGTAATGGATTTACAGTTTTTTGACCAGGAAAGAATTGTCGCTGCTTCATCAACAGGATGTGTAACAGTTTTCCTTCACCATCCAAATAACCAGACTCTGTCAGTCAACCAGCAGTGGACTACAGCTCACTACCACACAGGCCCTGGCAGTCCTTCCTATAGCAGTGCACCATGTACAGGTGTTGTGTGCAACAACCCAGAAATCGTTACAGTTGGAGAGGATGGTCGAATAAATCTCTTCAGAGCTGATCACAAGGAAGCTGTAAGAACCATAGACAATGCAGATAGTAGTACACTCCATGCTGTAACCTTTCTTCGAACTCCTGAGATTCTTACTGTAAATTCAATTGGACAGTTGAAAATATGGGATTTCAGACAACAAGGAAATGAGCCTTCTCAGATATTGTCACTGACTGGTGACCGAGTGCCACTCCACTGTGTTGATAGACATCCCAACCAACAGCATGTTGTAGCTACTGGTGGCCAAGATGGAATGTTGAGTATTTGGGATGTTAGACAAGGTACTATGCCTGTATCTCTGCTGAAGGCTCATGAAGCTGAAATGTGGGAAGTTCACTTTCACCCATCCAACCCAGAACATCTTTTTACCTGCTCTGAAGATGGATCCCTCTGGCACTGGGATGCTTCCACAGATGTACCTGAAAAGTCGTCACTCTTTCACCAAGGAGGAAGAAGCAGTACTTTTTTGTCTCATAGCATTAGTAACCAAGCTAATGTTCACCAGTCTGTCATTAGCTCCTGGCTCAGCACTGATCCTGCAAAAGACCGAATTGAAATCACAAGCTTACTTCCCAGTAGGTCTCTGTCTGTGAACACTTTGGATGTTTTAGGTCCTTGTCTTGTTTGTGGAACCGATGCAGAAGCAATTTATGTTACTAGACATCTTTTTTCGTAG
Amino sequence
MEEIYAKFVSQKISKTRWRPLPPGSLQTAETFATGSWDNEENYISLWSIGDFGNLDSDGGFEGDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEIVTVGEDGRINLFRADHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPEHLFTCSEDGSLWHWDASTDVPEKSSLFHQGGRSSTFLSHSISNQANVHQSVISSWLSTDPAKDRIEITSLLPSRSLSVNTLDVLGPCLVCGTDAEAIYVTRHLFS*