ENST00000263071.9 SCARF1
Information
- Transcript ID
- ENST00000263071.9
- Genome
- hg38
- Position
- chr17:1,633,858-1,645,732
- Strand
- -
- CDS length
- 2,493
- Amino acid length
- 831
- Gene symbol
- SCARF1
- Gene type
- protein-coding
- Gene description
- scavenger receptor class F member 1
- Gene Entrez Gene ID
- 8578
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 11 | 1,633,858 | 1,635,617 |
| 10 | 1,636,709 | 1,636,855 |
| 9 | 1,636,941 | 1,637,062 |
| 8 | 1,638,806 | 1,638,926 |
| 7 | 1,639,639 | 1,639,742 |
| 6 | 1,639,912 | 1,640,040 |
| 5 | 1,640,448 | 1,640,666 |
| 4 | 1,643,442 | 1,643,967 |
| 3 | 1,644,834 | 1,644,935 |
| 2 | 1,645,178 | 1,645,239 |
| 1 | 1,645,597 | 1,645,732 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 11 | CDS | 1,634,758 | 1,635,617 |
| 10 | CDS | 1,636,709 | 1,636,855 |
| 9 | CDS | 1,636,941 | 1,637,062 |
| 8 | CDS | 1,638,806 | 1,638,926 |
| 7 | CDS | 1,639,639 | 1,639,742 |
| 6 | CDS | 1,639,912 | 1,640,040 |
| 5 | CDS | 1,640,448 | 1,640,666 |
| 4 | CDS | 1,643,442 | 1,643,967 |
| 3 | CDS | 1,644,834 | 1,644,935 |
| 2 | CDS | 1,645,178 | 1,645,239 |
| 1 | CDS | 1,645,597 | 1,645,697 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 1,537,152 | 1,549,026 | Link |
CDS sequence
ATGGGGCTGGGGCTGCTGCTCCCGCTGCTGCTGCTCTGGACTCGGGGGACTCAGGGGTCCGAGCTGGACCCCAAAGGGCAGCACGTCTGTGTGGCCAGCAGCCCCTCTGCTGAGCTGCAGTGCTGCGCAGGCTGGAGGCAGAAGGATCAAGAATGCACCATCCCCATCTGTGAGGGGCCGGACGCCTGCCAGAAAGACGAGGTGTGTGTGAAGCCGGGCCTCTGTCGATGCAAGCCTGGATTCTTTGGGGCCCACTGCAGCTCCCGCTGCCCGGGCCAGTACTGGGGCCCCGACTGCCGTGAGAGCTGCCCCTGCCACCCGCACGGCCAGTGCGAGCCAGCCACGGGCGCGTGCCAGTGCCAGGCCGACCGCTGGGGAGCCCGCTGCGAGTTCCCGTGCGCCTGCGGCCCCCACGGGCGCTGCGACCCCGCGACCGGCGTGTGCCACTGCGAACCCGGCTGGTGGTCGTCCACGTGCCGCCGCCCGTGCCAGTGCAACACCGCGGCGGCGCGCTGCGAGCAGGCCACGGGCGCCTGCGTGTGCAAGCCGGGCTGGTGGGGGCGCCGCTGCAGCTTCCGCTGCAACTGCCACGGCTCCCCGTGCGAGCAGGACTCCGGCCGCTGCGCCTGCCGGCCGGGCTGGTGGGGTCCCGAATGCCAGCAGCAGTGCGAGTGTGTGCGGGGCCGCTGCAGCGCCGCCTCCGGCGAGTGCACCTGCCCGCCCGGCTTCCGCGGAGCGCGCTGCGAGCTGCCCTGCCCGGCAGGCAGCCACGGGGTGCAGTGCGCACACAGCTGTGGCCGCTGCAAACACAATGAGCCGTGCTCTCCAGACACAGGCAGCTGTGAGTCCTGCGAGCCGGGCTGGAACGGGACCCAGTGCCAGCAGCCCTGCCTGCCTGGCACCTTTGGCGAGAGCTGCGAACAGCAGTGCCCTCACTGCCGACATGGGGAGGCCTGTGAGCCAGATACTGGCCACTGTCAGCGCTGTGACCCTGGCTGGCTGGGGCCCAGGTGTGAAGACCCCTGCCCCACTGGTACCTTTGGGGAAGACTGTGGCTCTACCTGCCCCACCTGTGTTCAGGGGTCCTGTGATACTGTGACAGGGGACTGTGTCTGCAGTGCCGGCTACTGGGGGCCCAGCTGCAACGCCTCCTGCCCAGCCGGTTTCCATGGAAACAACTGCTCAGTTCCTTGTGAATGCCCAGAGGGACTCTGCCACCCTGTCTCTGGGTCCTGCCAGCCAGGCTCTGGCAGTCGGGACACTGCCCTCATCGCGGGCAGCCTTGTGCCTCTGCTGCTGCTCTTCCTGGGCCTTGCCTGCTGTGCCTGCTGCTGCTGGGCCCCCCGATCAGACCTCAAGGACAGGCCAGCGAGAGATGGAGCTACCGTGTCCAGGATGAAGCTGCAGGTCTGGGGGACACTGACCAGCTTGGGCTCCACGCTGCCCTGCCGTTCCCTCAGCTCCCACAAGCTACCCTGGGTGACAGTCTCACATCACGACCCGGAGGTCCCCTTCAACCACAGCTTCATCGAGCCGCCCTCTGCCGGCTGGGCCACTGATGACTCCTTCTCATCCGATCCTGAGTCTGGAGAGGCAGATGAGGTTCCTGCCTACTGTGTGCCACCCCAAGAAGGGATGGTCCCTGTGGCCCAGGCAGGGTCGTCAGAGGCCAGCCTGGCTGCAGGTGCTTTCCCGCCCCCTGAGGACGCCTCCACGCCATTCGCCATCCCGCGCACCTCCAGCCTAGCTCGGGCCAAGCGGCCATCGGTCTCCTTCGCGGAAGGTACCAAGTTTGCACCACAGAGTCGCCGAAGCTCAGGGGAGCTCTCCAGCCCGCTCCGAAAGCCCAAGAGGCTCTCCCGGGGGGCGCAGTCGGGTCCTGAGGGCCGGGAAGCCGAAGAGTCCACAGGCCCAGAGGAAGCAGAAGCCCCCGAGTCCTTTCCGGCGGCTGCCAGTCCCGGGGATTCAGCCACTGGCCACCGGCGGCCCCCACTTGGTGGCCGGACAGTGGCTGAGCACGTGGAAGCCATTGAGGGCAGCGTCCAGGAGAGCTCGGGCCCTGTGACCACGATCTACATGCTGGCAGGGAAGCCCCGCGGATCCGAAGGCCCTGTCCGCTCTGTCTTCCGCCATTTTGGTAGCTTCCAGAAAGGCCAGGCGGAAGCCAAGGTCAAGAGGGCCATCCCTAAGCCTCCGCGCCAGGCCCTGAATCGGAAAAAGGGCAGCCCTGGCCTTGCCTCTGGCTCTGTCGGCCAGAGCCCCAACTCAGCCCCAAAAGCTGGGCTTCCTGGGGCCACAGGGCCTATGGCAGTCAGACCAGAGGAAGCGGTCCGGGGGCTGGGGGCTGGCACCGAGAGTTCAAGGAGAGCCCAGGAGCCAGTCTCTGGCTGTGGCTCCCCAGAACAGGATCCCCAGAAGCAGGCTGAAGAGGAAAGGCAGGAGGAACCTGAGTATGAGAATGTTGTACCCATCTCCAGGCCACCAGAACCCTGA
Amino sequence
MGLGLLLPLLLLWTRGTQGSELDPKGQHVCVASSPSAELQCCAGWRQKDQECTIPICEGPDACQKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCRESCPCHPHGQCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRPGWWGPECQQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWNGTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCDPGWLGPRCEDPCPTGTFGEDCGSTCPTCVQGSCDTVTGDCVCSAGYWGPSCNASCPAGFHGNNCSVPCECPEGLCHPVSGSCQPGSGSRDTALIAGSLVPLLLLFLGLACCACCCWAPRSDLKDRPARDGATVSRMKLQVWGTLTSLGSTLPCRSLSSHKLPWVTVSHHDPEVPFNHSFIEPPSAGWATDDSFSSDPESGEADEVPAYCVPPQEGMVPVAQAGSSEASLAAGAFPPPEDASTPFAIPRTSSLARAKRPSVSFAEGTKFAPQSRRSSGELSSPLRKPKRLSRGAQSGPEGREAEESTGPEEAEAPESFPAAASPGDSATGHRRPPLGGRTVAEHVEAIEGSVQESSGPVTTIYMLAGKPRGSEGPVRSVFRHFGSFQKGQAEAKVKRAIPKPPRQALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTESSRRAQEPVSGCGSPEQDPQKQAEEERQEEPEYENVVPISRPPEP*