ENST00000629983.2 CAPNS1

Information
Transcript ID
ENST00000629983.2
Genome
hg38
Position
chr19:36,141,012-36,150,353
Strand
+
CDS length
285
Amino acid length
95
Gene symbol
CAPNS1
Gene type
protein-coding
Gene description
calpain small subunit 1
Gene Entrez Gene ID
826
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency
TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence
Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 36,141,012 36,141,075
2 36,146,037 36,146,054
3 36,146,196 36,146,312
4 36,149,578 36,149,636
5 36,149,813 36,150,353
CDS
Exon number Type Start Stop
1 CDS 36,141,012 36,141,075
2 CDS 36,146,037 36,146,054
3 CDS 36,146,196 36,146,312
4 CDS 36,149,578 36,149,636
5 CDS 36,149,813 36,149,839
Other genome
Genome Chromosome Start End Links
hg19 chr19 36,631,914 36,641,255 Link
CDS sequence
ATGTTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCTCTATAACATGATCATCCGACGCTACTCAGATGAAAGTGGGAACATGGATTTTGACAACTTCATCAGCTGCTTGGTCAGGCTGGACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGATGGCACTGGACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCTGACTATGTATTCCTGA
Amino sequence
MFLVNSFLKGGGGGGGGGGGLGAFEAAGFHLNEHLYNMIIRRYSDESGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTMYS*