ENST00000534968.5 CD84
Information
- Transcript ID
- ENST00000534968.5
- Genome
- hg38
- Position
- chr1:160,541,095-160,579,516
- Strand
- -
- CDS length
- 645
- Amino acid length
- 215
- Gene symbol
- CD84
- Gene type
- protein-coding
- Gene description
- CD84 molecule
- Gene Entrez Gene ID
- 8832
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 160,541,095 | 160,548,321 |
| 5 | 160,549,917 | 160,549,979 |
| 4 | 160,550,938 | 160,551,035 |
| 3 | 160,553,378 | 160,553,497 |
| 2 | 160,553,895 | 160,554,146 |
| 1 | 160,579,392 | 160,579,516 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 160,548,256 | 160,548,321 |
| 5 | CDS | 160,549,917 | 160,549,979 |
| 4 | CDS | 160,550,938 | 160,551,035 |
| 3 | CDS | 160,553,378 | 160,553,497 |
| 2 | CDS | 160,553,895 | 160,554,146 |
| 1 | CDS | 160,579,392 | 160,579,437 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr1 | 160,510,885 | 160,549,306 | Link |
CDS sequence
ATGGCTCAGCACCACCTATGGATCTTGCTCCTTTGCCTGCAAACCTGTCGGCTTGGGAAACCAAAAATTACACAGAGTTTAATGGCATCTGTGAACAGCACCTGTAATGTCACACTGACATGCTCTGTAGAGAAAGAAGAAAAGAATGTGACATACAATTGGAGTCCCCTGGGAGAAGAGGGTAATGTCCTTCAAATCTTCCAGACTCCTGAGGACCAAGAGCTGACTTACACGTGTACAGCCCAGAACCCTGTCAGCAACAATTCTGACTCCATCTCTGCCCGGCAGCTCTGTGCAGACATCGCAATGGGCTTCCGTACTCACCACACCGGGTTGCTGAGCGTGCTGGCTATGTTCTTTCTGCTTGTTCTCATTCTGTCTTCAGTGTTTTTGTTCCGTTTGTTCAAGAGAAGACAAGATGCTGCCTCAAAGAAAACCATATACACATATATCATGGCTTCAAGGAACACCCAGCCAGCAGAGTCCAGAATCTATGATGAAATCCTGCAGTCCAAGGTGCTTCCCTCCAAGGAAGAGCCAGTGAACACAGTTTATTCCGAAGTGCAGTTTGCTGATAAGATGGGGAAAGCCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAG
Amino sequence
MAQHHLWILLLCLQTCRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYDEILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI*