ENST00000536708.6 CDK5RAP3

Information
Transcript ID
ENST00000536708.6
Genome
hg38
Position
chr17:47,970,534-47,981,772
Strand
+
CDS length
1,596
Amino acid length
532
Gene symbol
CDK5RAP3
Gene type
protein-coding
Gene description
CDK5 regulatory subunit associated protein 3
Gene Entrez Gene ID
80279
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 47,970,534 47,970,723
2 47,971,362 47,971,407
3 47,973,519 47,973,650
4 47,973,931 47,974,031
5 47,974,400 47,974,448
6 47,975,159 47,975,337
7 47,975,514 47,975,653
8 47,975,869 47,976,013
9 47,976,712 47,976,822
10 47,977,832 47,977,910
11 47,978,829 47,978,917
12 47,980,593 47,980,798
13 47,981,163 47,981,334
14 47,981,437 47,981,772
CDS
Exon number Type Start Stop
1 CDS 47,970,643 47,970,723
2 CDS 47,971,362 47,971,407
3 CDS 47,973,519 47,973,650
4 CDS 47,973,931 47,974,031
5 CDS 47,974,400 47,974,448
6 CDS 47,975,159 47,975,337
7 CDS 47,975,514 47,975,653
8 CDS 47,975,869 47,976,013
9 CDS 47,976,712 47,976,822
10 CDS 47,977,832 47,977,910
11 CDS 47,978,829 47,978,917
12 CDS 47,980,593 47,980,798
13 CDS 47,981,163 47,981,334
14 CDS 47,981,437 47,981,502
Other genome
Genome Chromosome Start End Links
hg19 chr17 46,047,900 46,059,138 Link
CDS sequence
ATGAGGAGGCAAAGCATGACAAGTGCCACAAGAGACCTGCACACTGCTCTGGATGGTAAAGCGACGCAAGGAGGGAAGAAGGACCATCAGCACGTGCCCATCGACATCCAGACCAGCAAGCTGCTCGATTGGCTGGTGGACAGAAGGCACTGCAGCCTGAAATGGCAGAGTCTGGTGCTGACGATCCGCGAGAAGATCAATGCTGCCATCCAGGACATGCCAGAGAGCGAAGAGATCGCCCAGCTGCTGTCTGGGTCCTACATTCACTACTTTCACTGCCTAAGAATCCTGGACCTTCTCAAAGGCACAGAGGCCTCCACGAAGAATATTTTTGGCCGATACTCTTCACAGCGGATGAAGGATTGGCAGGAGATTATAGCTCTGTATGAGAAGGACAACACCTACTTAGTGGAACTCTCTAGCCTCCTGGTTCGGAATGTCAACTATGAGATCCCCTCACTGAAGAAGCAGATTGCCAAGTGCCAGCAGCTGCAGCAAGAATACAGCCGCAAGGAGGAGGAGTGCCAGGCAGGGGCTGCCGAGATGCGGGAGCAGTTCTACCACTCCTGCAAGCAGTATGGCATCACGGGCGAAAATGTCCGAGGAGAACTGCTGGCCCTGGTGAAGGACCTGCCGAGTCAGCTGGCTGAGATTGGGGCAGCGGCTCAGCAGTCCCTGGGGGAAGCCATTGACGTGTACCAGGCGTCTGTGGGGTTTGTGTGTGAGAGCCCCACAGAGCAGGTGTTGCCAATGCTGCGGTTCGTGCAGAAGCGGGGAAACTCAACGGTGTACGAGTGGAGGACAGGGACAGAGCCCTCTGTGGTGGAACGACCCCACCTCGAGGAGCTTCCTGAGCAGGTGGCAGAAGATGCGATTGACTGGGGCGACTTTGGGGTAGAGGCAGTGTCTGAGGGGACTGACTCTGGCATCTCTGCCGAGGCTGCTGGAATCGACTGGGGCATCTTCCCGGAATCAGATTCAAAGGATCCTGGAGGTGATGGGATAGACTGGGGAGACGATGCTGTTGCTTTGCAGATCACAGTGCTGGAAGCAGGAACCCAGGCTCCAGAAGGTGTTGCCAGGGGCCCAGATGCCCTGACACTGCTTGAATACACTGAGACCCGGAATCAGTTCCTTGATGAGCTCATGGAGCTTGAGATCTTCTTAGCCCAGAGAGCAGTGGAGTTGAGTGAGGAGGCAGATGTCCTGTCTGTGAGCCAGTTCCAGCTGGCTCCAGCCATCCTGCAGGGCCAGACCAAAGAGAAGATGGTTACCATGGTGTCAGTGCTGGAGGATCTGATTGGCAAGCTTACCAGTCTTCAGCTGCAACACCTGTTTATGATCCTGGCCTCACCAAGGTATGTGGACCGAGTGACTGAATTCCTCCAGCAAAAGCTGAAGCAGTCCCAGCTGCTGGCTTTGAAGAAAGAGCTGATGGTGCAGAAGCAGCAGGAGGCACTTGAGGAGCAGGCGGCTCTGGAGCCTAAGCTGGACCTGCTACTGGAGAAGACCAAGGAGCTGCAGAAGCTGATTGAAGCTGACATCTCCAAGAGGTACAGCGGGCGCCCTGTGAACCTGATGGGAACCTCTCTGTGA
Amino sequence
MRRQSMTSATRDLHTALDGKATQGGKKDHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMPESEEIAQLLSGSYIHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEIIALYEKDNTYLVELSSLLVRNVNYEIPSLKKQIAKCQQLQQEYSRKEEECQAGAAEMREQFYHSCKQYGITGENVRGELLALVKDLPSQLAEIGAAAQQSLGEAIDVYQASVGFVCESPTEQVLPMLRFVQKRGNSTVYEWRTGTEPSVVERPHLEELPEQVAEDAIDWGDFGVEAVSEGTDSGISAEAAGIDWGIFPESDSKDPGGDGIDWGDDAVALQITVLEAGTQAPEGVARGPDALTLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVSQFQLAPAILQGQTKEKMVTMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQEALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMGTSL*