ENST00000454782.3 PXT1
Information
- Transcript ID
- ENST00000454782.3
- Genome
- hg38
- Position
- chr6:36,390,551-36,442,854
- Strand
- -
- CDS length
- 405
- Amino acid length
- 135
- Gene symbol
- PXT1
- Gene type
- protein-coding
- Gene description
- peroxisomal testis enriched protein 1
- Gene Entrez Gene ID
- 222659
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 36,390,551 | 36,391,874 |
| 4 | 36,400,454 | 36,400,584 |
| 3 | 36,425,914 | 36,426,091 |
| 2 | 36,438,767 | 36,438,886 |
| 1 | 36,442,535 | 36,442,854 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 36,391,770 | 36,391,874 |
| 4 | CDS | 36,400,454 | 36,400,584 |
| 3 | CDS | 36,425,914 | 36,426,082 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr6 | 36,358,328 | 36,410,631 | Link |
CDS sequence
ATGAAGAAAAAACATGATGGCATTGTTTATGAAACTAAAGAAGTTCTCAATCCATCTCCCAAAGTAACACATTGTTGCAAATCACTGTGGTTAAAATACAGTTTTCAGAAGGCATACATGACCCAACTTGTCAGCTCCCAGCCAGTTCCAGCCATGTCAAGGAACCCAGATCATAATCTACTTTCTCAGCCCAAGGAGCATAGCATTGTTCAGAAGCATCACCAGGAGGAAATAATTCACAAGTTGGCCATGCAGCTGAGACACATTGGGGACAACATTGATCATAGGATGGTTCGAGAGGATCTTCAACAGGATGGCAGAGATGCACTAGATCATTTTGTCTTCTTTTTCTTTAGAAGAGTTCAGGTGTTGCTGCATTTTTTCTGGAACAACCATTTGCTGTAA
Amino sequence
MKKKHDGIVYETKEVLNPSPKVTHCCKSLWLKYSFQKAYMTQLVSSQPVPAMSRNPDHNLLSQPKEHSIVQKHHQEEIIHKLAMQLRHIGDNIDHRMVREDLQQDGRDALDHFVFFFFRRVQVLLHFFWNNHLL*