ENST00000599460.5 SYMPK

Information
Transcript ID
ENST00000599460.5
Genome
hg38
Position
chr19:45,818,913-45,863,130
Strand
-
CDS length
3,177
Amino acid length
1,059
Gene symbol
SYMPK
Gene type
protein-coding
Gene description
symplekin scaffold protein
Gene Entrez Gene ID
8189
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
22 45,818,913 45,821,485
21 45,822,756 45,822,846
20 45,823,372 45,823,472
19 45,823,767 45,823,875
18 45,825,171 45,825,331
17 45,826,226 45,826,373
16 45,827,510 45,827,623
15 45,827,837 45,827,918
14 45,828,970 45,829,205
13 45,830,054 45,830,204
12 45,831,384 45,831,588
11 45,835,078 45,835,228
10 45,838,461 45,838,615
9 45,842,250 45,842,489
8 45,844,030 45,844,200
7 45,847,752 45,848,001
6 45,848,750 45,848,876
5 45,852,312 45,852,385
4 45,852,482 45,852,535
3 45,854,175 45,854,240
2 45,854,391 45,854,507
1 45,863,058 45,863,130
CDS
Exon number Type Start Stop
22 CDS 45,821,100 45,821,485
21 CDS 45,822,756 45,822,846
20 CDS 45,823,372 45,823,472
19 CDS 45,823,767 45,823,875
18 CDS 45,825,171 45,825,331
17 CDS 45,826,226 45,826,373
16 CDS 45,827,510 45,827,623
15 CDS 45,827,837 45,827,918
14 CDS 45,828,970 45,829,205
13 CDS 45,830,054 45,830,204
12 CDS 45,831,384 45,831,588
11 CDS 45,835,078 45,835,228
10 CDS 45,838,461 45,838,615
9 CDS 45,842,250 45,842,489
8 CDS 45,844,030 45,844,200
7 CDS 45,847,752 45,848,001
6 CDS 45,848,750 45,848,876
5 CDS 45,852,312 45,852,385
4 CDS 45,852,482 45,852,535
3 CDS 45,854,175 45,854,240
2 CDS 45,854,391 45,854,495
Other genome
Genome Chromosome Start End Links
hg19 chr19 46,322,171 46,366,388 Link
CDS sequence
ATGGCGAGCGGCAGTGGAGACAGCGTCACCCGTCGGAGCGTGGCATCACAGTTTTTCACTCAAGAGGAGGGGCCGGGCATCGATGGCATGACCACCTCAGAGAGGGTGGTGGATCTTCTGAACCAGGCGGCGCTGATCACCAATGACTCAAAGATCACAGTGCTCAAACAGGTCCAGGAGCTGATCATCAACAAAGACCCCACACTACTGGACAACTTCCTGGATGAGATCATCGCATTCCAAGCAGACAAGTCAATCGAAGTGCGAAAATTTGTCATCGGCTTCATCGAGGAGGCATGCAAGCGAGACATTGAGTTGCTGCTGAAACTCATTGCAAACCTCAACATGCTCTTGAGGGACGAGAATGTGAACGTGGTGAAGAAGGCTATCCTCACCATGACCCAGCTCTACAAGGTGGCCCTGCAGTGGATGGTAAAGTCACGGGTCATTAGCGAGCTACAGGAGGCCTGCTGGGACATGGTATCTGCCATGGCGGGGGACATCATCCTGCTATTGGACTCTGACAATGACGGCATCCGCACCCACGCCATCAAGTTTGTGGAGGGCCTCATTGTCACCCTGTCACCCCGCATGGCTGACTCAGAGATACCCCGACGCCAGGAGCATGATATCAGCCTGGACCGCATCCCTCGTGACCACCCCTACATCCAGTACAACGTGCTATGGGAAGAGGGCAAGGCAGCCTTGGAGCAGCTGCTTAAGTTCATGGTGCACCCTGCCATCTCCTCCATCAACCTGACCACAGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGAGACCCATGTTCATGTCTGAGGTGATCCAGGCCTATGAAACTCTGCATGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGTGCTGAAGCACCCGGCTTCCTTGGAGTTCCAGGCCCAGATCACCACCCTGCTGGTGGACCTGGGCACACCTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGACTCGGACTCCACACTCAAGAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACGATGAGGACAAAGACTTGGAGCCAGGCCCGTCGGGGACCTCGAAGGCCTCAGCGCAGATCTCCGGCCAGTCAGACACGGACATCACAGCTGAGTTCCTGCAGCCTCTGCTGACGCCTGATAATGTGGCTAATCTGGTCCTCATCAGCATGGTGTACCTACCCGAGGCCATGCCAGCCTCCTTCCAGGCCATCTACACCCCCGTGGAGTCAGCAGGCACGGAAGCCCAGATCAAGCACCTGGCTCGGCTCATGGCCACACAGATGACAGCTGCCGGACTGGGACCAGGTGTAGAGCAGACCAAACAGTGCAAGGAGGAGCCCAAGGAGGAGAAGGTGGTGAAGACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTTCCCTGAGCTCCATGTCCCCCCTGGAGGAAGAGGCACCGCAGGCCAAGAGGAGGCCAGAGCCCATTATCCCTGTCACTCAGCCCCGGCTGGCAGGCGCTGGTGGGCGCAAGAAAATTTTCCGTCTCAGCGACGTGCTGAAGCCCCTTACCGATGCCCAGGTGGAAGCCATGAAGCTGGGCGCTGTGAAGCGGATCCTGCGGGCTGAGAAGGCTGTGGCCTGCAGCGGGGCAGCCCAGGTCCGCATAAAGATCCTGGCCAGCCTGGTGACACAGTTCAACTCGGGCCTGAAGGCGGAGGTCCTGTCCTTCATCCTGGAGGATGTGCGGGCCCGCCTGGACCTGGCCTTCGCCTGGCTCTACCAGGAGTACAACGCCTACCTGGCCGCAGGTGCCTCGGGCTCCCTGGACAAGTATGAGGACTGCCTCATCCGCCTGTTGTCTGGCCTGCAGGAGAAACCAGACCAGAAGGATGGGATCTTCACCAAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGTGCCCTGGAGGTGGTCCGCAAGTACTGCGAGGATGAGAGTCGCACCTATCTGGGCATGTCCACACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGCCCTGCTGTTCATCAAACGCATGTATGAGAAGGAGCAGCTGCGGGAGTATGTGGAGAAATTTGCCCTCAACTACCTGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAGGACACAGAGGTGGCAGCACCCTGGACGGAGGAGACAGTGAAGCAGTGTCTGTACCTCTACCTGGCCCTCCTGCCTCAGAACCACAAGCTGATCCACGAACTGGCGGCCGTGTACACTGAAGCCATCGCCGACATCAAGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACACTGGTCACGAGATGTCTGCACAGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCTGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCCTCATCCCGGTGCTCAATGGGCTGGAGAAGAAAGAGGTGATCCAGGCCCTGCCTAAACTCATCAAACTCAACCCCATCGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTCAGCCTTGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACTCCGTGAAGTGCGACATGAAATCCATCATCAAAGGTGAGGCGCTTCCCCCCCACTCCAGTGGCCTGGCCCCTGCGACGCCAGGGCAGGACCTCAGTCACCCACATGCCCCCACTGGAATCTGCCAAGTCAAAGACTGTCACTCACAGCCCCACCTCAGAGCTCTGGAGAGCCACCTCCCTCCCTCCCTCCTTTTCTTGCCTCCTCTTCCCTCCCTCCCTCCCTCCCTCCTCCTTCCTTCCTCCCAGGTTTTACCCTTTACAACCCACCTTTTTCTGCCTCTGATGTACCTGCTGTGCCCTGGCACAGAGTGGGCCTAA
Amino sequence
MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRDENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIRTHAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLLKFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDSDSTLKKMKLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMVYLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEKVVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGRKKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFNSGLKAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVVRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMKSIIKGEALPPHSSGLAPATPGQDLSHPHAPTGICQVKDCHSQPHLRALESHLPPSLLFLPPLPSLPPSLLLPSSQVLPFTTHLFLPLMYLLCPGTEWA*