ENST00000616129.4 PCGF2
Information
- Transcript ID
- ENST00000616129.4
- Genome
- hg38
- Position
- chr17:38,735,044-38,748,378
- Strand
- -
- CDS length
- 774
- Amino acid length
- 258
- Gene symbol
- PCGF2
- Gene type
- protein-coding
- Gene description
- polycomb group ring finger 2
- Gene Entrez Gene ID
- 7703
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 11 | 38,735,044 | 38,735,600 |
| 10 | 38,736,090 | 38,736,170 |
| 9 | 38,738,353 | 38,738,448 |
| 8 | 38,738,541 | 38,738,595 |
| 7 | 38,738,749 | 38,738,861 |
| 6 | 38,739,068 | 38,739,118 |
| 5 | 38,739,198 | 38,739,253 |
| 4 | 38,739,586 | 38,739,682 |
| 3 | 38,740,291 | 38,740,442 |
| 2 | 38,747,879 | 38,747,971 |
| 1 | 38,748,196 | 38,748,378 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 11 | CDS | 38,735,488 | 38,735,600 |
| 10 | CDS | 38,736,090 | 38,736,170 |
| 9 | CDS | 38,738,353 | 38,738,448 |
| 8 | CDS | 38,738,541 | 38,738,595 |
| 7 | CDS | 38,738,749 | 38,738,861 |
| 6 | CDS | 38,739,068 | 38,739,118 |
| 5 | CDS | 38,739,198 | 38,739,253 |
| 4 | CDS | 38,739,586 | 38,739,682 |
| 3 | CDS | 38,740,291 | 38,740,402 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 36,891,297 | 36,904,631 | Link |
CDS sequence
ATGCATCGGACTACACGGATCAAAATCACAGAGCTGAACCCCCACCTCATGTGTGCCCTCTGCGGGGGGTACTTCATCGACGCCACCACTATCGTGGAGTGCCTGCATTCCTTCTGCAAAACCTGCATCGTGCGCTACCTGGAGACCAACAAATACTGCCCCATGTGTGACGTGCAGGTCCATAAAACCCGGCCGCTGCTGAGCATCAGGTCTGACAAAACACTTCAAGACATTGTCTACAAATTGGTCCCTGGGCTTTTTAAAGATGAGATGAAACGGCGGCGGGATTTCTATGCAGCGTACCCCCTGACGGAGGTCCCCAACGGCTCCAATGAGGACCGCGGCGAGGTCTTGGAGCAGGAGAAGGGGGCTCTGAGTGATGATGAGATTGTCAGCCTCTCCATCGAATTCTACGAAGGTGCCAGGCAAGGACCGGGACGAGAAGAAGGGCCCCCTGGAGAATGGGGATGGGGACAAAGAGAAAACAGGGGTGCGCTTCCTGCGATGCCCAGCAGCCATGACCGTCATGCATCTTGCCAAGTTTCTCCGCAACAAGATGGATGTGCCCAGCAAGTACAAGGTGGAGGTTCTGTACGAGGACGAGCCACTGAAGGAATACTACACCCTCATGGACATCGCCTACATCTACCCCTGGCGGCGGAACGGGCCTCTCCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTAGCCACGGTGCCCACCCCCTCCGAGGGCACCAACACCAGCGGGGCGTCCGAGTGTGA
Amino sequence
MHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLEQEKGALSDDEIVSLSIEFYEGARQGPGREEGPPGEWGWGQRENRGALPAMPSSHDRHASCQVSPQQDGCAQQVQGGGSVRGRATEGILHPHGHRLHLPLAAERASPPQVPCPASLQAAHPSHGAHPLRGHQHQRGVRV*