ENST00000542145.5 RAP1B
Information
- Transcript ID
- ENST00000542145.5
- Genome
- hg38
- Position
- chr12:68,610,929-68,659,754
- Strand
- +
- CDS length
- 414
- Amino acid length
- 138
- Gene symbol
- RAP1B
- Gene type
- protein-coding
- Gene description
- RAP1B, member of RAS oncogene family
- Gene Entrez Gene ID
- 5908
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 68,610,929 | 68,611,043 |
| 2 | 68,648,699 | 68,648,781 |
| 3 | 68,650,400 | 68,650,468 |
| 4 | 68,651,995 | 68,652,051 |
| 5 | 68,656,306 | 68,656,449 |
| 6 | 68,657,101 | 68,657,217 |
| 7 | 68,659,280 | 68,659,754 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 68,648,725 | 68,648,781 |
| 3 | CDS | 68,650,400 | 68,650,468 |
| 4 | CDS | 68,651,995 | 68,652,051 |
| 5 | CDS | 68,656,306 | 68,656,449 |
| 6 | CDS | 68,657,101 | 68,657,187 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 69,004,709 | 69,053,534 | Link |
CDS sequence
ATGCGTGAGTATAAGCTAGTCGTTCTTGGCTCAGGAGGCGTTGGAAAGTCTGCTTTGACTGTACAATTTGTTCAAGGAATTTTTGTAGAAAAATACGATCCTACGATAGAAGATTCTTATAGAAAGCAAGTTGAAGTAGATGCACAACAGTGTATGCTTGAAATCTTGGATACTGCAGGAACGGTTCCAATGATTCTTGTTGGTAATAAGTGTGACTTGGAAGATGAAAGAGTTGTAGGGAAGGAACAAGGTCAAAATCTAGCAAGACAATGGAACAACTGTGCATTCTTAGAATCTTCTGCAAAATCAAAAATAAATGTTAATGAGATCTTTTATGACCTAGTGCGGCAAATTAACAGAAAAACTCCAGTGCCTGGGAAGGCTCGCAAAAAGTCATCATGTCAGCTGCTTTAA
Amino sequence
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKSSCQLL*