ENST00000316577.12 TESPA1

Information
Transcript ID
ENST00000316577.12
Genome
hg38
Position
chr12:54,950,170-54,981,838
Strand
-
CDS length
1,566
Amino acid length
522
Gene symbol
TESPA1
Gene type
protein-coding
Gene description
thymocyte expressed, positive selection associated 1
Gene Entrez Gene ID
9840
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 54,950,170 54,950,390
10 54,961,168 54,961,267
9 54,962,431 54,963,242
8 54,963,742 54,963,950
7 54,966,053 54,966,151
6 54,966,388 54,966,424
5 54,967,183 54,967,236
4 54,967,843 54,967,892
3 54,973,477 54,973,519
2 54,974,400 54,974,607
1 54,981,774 54,981,838
CDS
Exon number Type Start Stop
10 CDS 54,961,169 54,961,267
9 CDS 54,962,431 54,963,242
8 CDS 54,963,742 54,963,950
7 CDS 54,966,053 54,966,151
6 CDS 54,966,388 54,966,424
5 CDS 54,967,183 54,967,236
4 CDS 54,967,843 54,967,892
3 CDS 54,973,477 54,973,519
2 CDS 54,974,400 54,974,562
Other genome
Genome Chromosome Start End Links
hg19 chr12 55,343,954 55,375,622 Link
CDS sequence
ATGGAGGCCTCTGTGCTGAGCCCCACATCCTGGGAGAAACGGCGGGCCTGGCTCCGTCAGAGCCGTAACTGGCAGACCCAGGTCCTAGAAGAGGAGGCTGCCGCCGCCCTGCAGGATGTCCCAGATCCTGAGCCTTCCAGCCTGGATGACGTTTTCCAAGAAGGGAATCCAATCAATAAAATTGAAGACTGGCTGCAGGATTGCGGATACTCTGAAGAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTACAATGGCTTCTGCAGCCATGGGACCAGCTTTGAAGATGACTTGACCCTGGGAGCGGAGGCCACACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGGCTGTAGTTTGGCTTCCAGCAGCATGACTGGGGGGACCAACAAGACTAGTTCAAGCATCTCAGAAATTCTGGACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGACACTTCTCGGATACCCGCCCGATTTTTCACCACCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCTTCCTGAAGTCCCAGGTGCGGAGGATTGAAATGGAAGACCCCTGCCTCATGCTGGCCAGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCACTGCTGATGCCTTCTTCTGTCTCTACTCCTATGTGTCTAAGACACCTGTCCAAAAGTTCACACCATCCCACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACCACCACCCCACAACACCCCCAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCCTGCTGAGGGTAAGAAGTTGCCCACTTCTCCCTATCCATGTGTCTTCTGCTGTGAAGAGGAAACACAGCAGAGGATGTCCACAGTGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAGAGCTGTGTAGTCTACCAGCCACCAATACGGAAACCCATCCAGCCAAGGATGAGACTTTCTGGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGGCAGGAAGGTTAAGTCCTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACCACCAGACTTTTGCTGGCAAAGACTCGTGA
Amino sequence
MEASVLSPTSWEKRRAWLRQSRNWQTQVLEEEAAAALQDVPDPEPSSLDDVFQEGNPINKIEDWLQDCGYSEEGFSEEAGQFIYNGFCSHGTSFEDDLTLGAEATLLAANGKLFSRSFLETARPCQLLDLGCSLASSSMTGGTNKTSSSISEILDKVQEDAEDVLFSLGFGQEDHKDTSRIPARFFTTPSQAKGIDFQLFLKSQVRRIEMEDPCLMLASRFKQVQTLAVTADAFFCLYSYVSKTPVQKFTPSHMFWNCNHPTDVPSIRILSREPEPQSPRDRLRKAISKMCLYTCPRDRPPPPHNTPKRNSLDQVVLEVMDKVKEEKQFLQQDSDLGQFSQEDPVPPAEGKKLPTSPYPCVFCCEEETQQRMSTVLAPSQTLDSNPKVPCCTHSLPIEDPQWSTDPAQIRRELCSLPATNTETHPAKDETFWKRKSRARKSLFQKNLMGRKVKSLDLSITQQKWKQSVDRPELRRSLSQQPQDTFDLEEVQSNSEEEQSQSRWPSRPRHPHHHQTFAGKDS*