ENST00000626948.3 SOX2-OT

Information
Transcript ID
ENST00000626948.3
Genome
hg38
Position
chr3:180,989,770-181,791,029
Strand
+
CDS length
0
Amino acid length
0
Gene symbol
SOX2-OT
Gene type
ncRNA
Gene description
SOX2 overlapping transcript
Gene Entrez Gene ID
347689
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 180,989,770 180,989,840
2 181,056,697 181,056,786
3 181,088,877 181,088,917
4 181,175,514 181,175,583
5 181,563,720 181,563,928
6 181,610,861 181,610,929
7 181,699,598 181,699,883
8 181,715,185 181,715,292
9 181,774,261 181,774,415
10 181,778,535 181,778,662
11 181,790,673 181,791,029
Other genome
Genome Chromosome Start End Links
hg19 chr3 180,707,558 181,508,817 Link
CDS sequence
Amino sequence