ENST00000227348.9 CRTAM
Information
- Transcript ID
- ENST00000227348.9
- Genome
- hg38
- Position
- chr11:122,838,500-122,872,643
- Strand
- +
- CDS length
- 1,182
- Amino acid length
- 394
- Gene symbol
- CRTAM
- Gene type
- protein-coding
- Gene description
- cytotoxic and regulatory T cell molecule
- Gene Entrez Gene ID
- 56253
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 122,838,500 | 122,838,592 |
| 2 | 122,850,068 | 122,850,214 |
| 3 | 122,851,693 | 122,851,845 |
| 4 | 122,853,943 | 122,854,086 |
| 5 | 122,855,695 | 122,855,856 |
| 6 | 122,862,464 | 122,862,544 |
| 7 | 122,864,636 | 122,864,719 |
| 8 | 122,867,409 | 122,867,555 |
| 9 | 122,868,013 | 122,868,099 |
| 10 | 122,871,269 | 122,872,643 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 122,838,547 | 122,838,592 |
| 2 | CDS | 122,850,068 | 122,850,214 |
| 3 | CDS | 122,851,693 | 122,851,845 |
| 4 | CDS | 122,853,943 | 122,854,086 |
| 5 | CDS | 122,855,695 | 122,855,856 |
| 6 | CDS | 122,862,464 | 122,862,544 |
| 7 | CDS | 122,864,636 | 122,864,719 |
| 8 | CDS | 122,867,409 | 122,867,555 |
| 9 | CDS | 122,868,013 | 122,868,099 |
| 10 | CDS | 122,871,269 | 122,871,399 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 122,709,208 | 122,743,351 | Link |
CDS sequence
ATGTGGTGGAGAGTTCTCAGCTTGCTGGCATGGTTCCCCTTGCAAGAGGCCTCTCTGACTAACCACACAGAAACCATCACCGTGGAGGAAGGCCAGACGCTCACTCTAAAGTGTGTCACTTCTCTGAGGAAGAACTCCTCCCTCCAGTGGCTGACCCCCTCAGGGTTCACCATTTTTTTAAATGAGTATCCTGCTTTAAAAAATTCCAAATACCAGCTTCTTCATCACTCGGCCAATCAGCTCTCCATCACTGTGCCTAACGTAACCCTGCAAGATGAAGGCGTGTACAAGTGCTTACATTACAGCGACTCTGTAAGCACAAAGGAAGTGAAAGTGATTGTGCTGGCAACTCCTTTCAAGCCAATCCTGGAAGCTTCAGTTATCAGAAAGCAAAATGGAGAAGAACATGTTGTACTCATGTGCTCCACCATGAGAAGCAAGCCCCCTCCGCAGATAACCTGGCTACTTGGGAATAGCATGGAAGTGTCCGGTGGAACGCTCCATGAATTTGAAACTGATGGGAAGAAATGTAATACTACCAGCACTCTCATAATCCACACTTATGGCAAAAATTCAACGGTGGACTGCATTATCCGACACAGAGGCCTGCAAGGGAGAAAACTAGTAGCACCCTTCCGGTTTGAAGATTTGGTTACTGATGAAGAGACAGCTTCAGATGCTCTGGAGAGAAACTCTCTATCCTCTCAAGACCCACAGCAGCCCACCAGTACTGTCTCAGTAACGGAAGATTCTAGTACATCGGAGATTGACAAGGAAGAGAAAGAACAAACCACTCAAGATCCTGACTTGACCACCGAAGCAAATCCTCAGTATTTAGGACTGGCAAGAAAGAAAAGTGGCATCCTGCTGCTCACGCTGGTGTCCTTCCTCATTTTCATACTCTTCATCATAGTCCAGCTCTTCATCATGAAGCTGAGGAAAGCACATGTGATATGGAAGAAAGAAAACGAAGTTTCAGAACACACACTAGAAAGTTACAGATCAAGGTCAAATAATGAAGAAACATCATCTGAAGAGAAAAATGGCCAATCTTCCCACCCTATGCGTTGCATGAACTACATCACAAAGTTGTACTCAGAAGCAAAAACAAAGAGGAAGGAAAATGTACAACATTCAAAATTAGAAGAAAAGCACATCCAAGTACCAGAGAGTATTGTGTAG
Amino sequence
MWWRVLSLLAWFPLQEASLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVIVLATPFKPILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFETDGKKCNTTSTLIIHTYGKNSTVDCIIRHRGLQGRKLVAPFRFEDLVTDEETASDALERNSLSSQDPQQPTSTVSVTEDSSTSEIDKEEKEQTTQDPDLTTEANPQYLGLARKKSGILLLTLVSFLIFILFIIVQLFIMKLRKAHVIWKKENEVSEHTLESYRSRSNNEETSSEEKNGQSSHPMRCMNYITKLYSEAKTKRKENVQHSKLEEKHIQVPESIV*