ENST00000586016.5 SLC25A39
Information
- Transcript ID
- ENST00000586016.5
- Genome
- hg38
- Position
- chr17:44,319,673-44,324,782
- Strand
- -
- CDS length
- 684
- Amino acid length
- 228
- Gene symbol
- SLC25A39
- Gene type
- protein-coding
- Gene description
- solute carrier family 25 member 39
- Gene Entrez Gene ID
- 51629
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 44,319,673 | 44,320,116 |
| 7 | 44,320,196 | 44,320,276 |
| 6 | 44,320,355 | 44,320,436 |
| 5 | 44,320,622 | 44,320,731 |
| 4 | 44,321,058 | 44,321,231 |
| 3 | 44,321,434 | 44,321,558 |
| 2 | 44,321,700 | 44,321,767 |
| 1 | 44,324,711 | 44,324,782 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 44,320,001 | 44,320,116 |
| 7 | CDS | 44,320,196 | 44,320,276 |
| 6 | CDS | 44,320,355 | 44,320,436 |
| 5 | CDS | 44,320,622 | 44,320,731 |
| 4 | CDS | 44,321,058 | 44,321,231 |
| 3 | CDS | 44,321,434 | 44,321,554 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 42,397,041 | 42,402,150 | Link |
CDS sequence
ATGACTGTGCCAGCTACCGCCATCTACTTCACTGCCTATGACCAACTGAAGGCCTTCCTGTGTGGTCGAGCCCTGACCTCTGACCTCTACGCACCCATGGTGGCTGGCGCGCTGGCCCGCCTGGGCACCGTGACTGTGATCAGCCCCCTGGAGCTTATGCGGACAAAGCTGCAGGCTCAGCATGTGTCGTACCGGGAGCTGGGTGCCTGTGTTCGAACTGCAGTGGCTCAGGGTGGCTGGCGCTCACTGTGGCTGGGCTGGGGCCCCACTGCCCTTCGAGATGTGCCCTTCTCAGCCCTGTACTGGTTCAACTATGAGCTGGTGAAGAGCTGGCTCAATGGGTTCAGGCCGAAGGACCAGACTTCTGTGGGCATGAGCTTTGTGGCTGGTGGCATCTCAGGGACGGTGGCTGCAGTGCTGACTCTACCCTTTGACGTGGTAAAGACCCAACGCCAGGTCGCTCTGGGAGCGATGGAGGCTGTGAGAGTGAACCCCCTGCATGTGGACTCCACCTGGCTGCTGCTGCGGAGGATCCGGGCCGAGTCGGGCACCAAGGGACTCTTTGCAGGCTTCCTTCCTCGGATCATCAAGGCTGCCCCCTCCTGTGCCATCATGATCAGCACCTATGAGTTCGGCAAAAGCTTCTTCCAGAGGCTGAACCAGGACCGGCTTCTGGGCGGCTGA
Amino sequence
MTVPATAIYFTAYDQLKAFLCGRALTSDLYAPMVAGALARLGTVTVISPLELMRTKLQAQHVSYRELGACVRTAVAQGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSWLNGFRPKDQTSVGMSFVAGGISGTVAAVLTLPFDVVKTQRQVALGAMEAVRVNPLHVDSTWLLLRRIRAESGTKGLFAGFLPRIIKAAPSCAIMISTYEFGKSFFQRLNQDRLLGG*