ENST00000372743.5 RBPJL

Information
Transcript ID
ENST00000372743.5
Genome
hg38
Position
chr20:45,306,851-45,316,959
Strand
+
CDS length
1,551
Amino acid length
517
Gene symbol
RBPJL
Gene type
protein-coding
Gene description
recombination signal binding protein for immunoglobulin kappa J region like
Gene Entrez Gene ID
11317
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 45,306,851 45,306,944
2 45,308,143 45,308,251
3 45,309,567 45,309,692
4 45,311,589 45,311,659
5 45,311,839 45,311,954
6 45,312,221 45,312,395
7 45,313,468 45,313,605
8 45,314,035 45,314,144
9 45,314,413 45,314,565
10 45,316,187 45,316,342
11 45,316,477 45,316,580
12 45,316,689 45,316,959
CDS
Exon number Type Start Stop
1 CDS 45,306,923 45,306,944
2 CDS 45,308,143 45,308,251
3 CDS 45,309,567 45,309,692
4 CDS 45,311,589 45,311,659
5 CDS 45,311,839 45,311,954
6 CDS 45,312,221 45,312,395
7 CDS 45,313,468 45,313,605
8 CDS 45,314,035 45,314,144
9 CDS 45,314,413 45,314,565
10 CDS 45,316,187 45,316,342
11 CDS 45,316,477 45,316,580
12 CDS 45,316,689 45,316,959
Other genome
Genome Chromosome Start End Links
hg19 chr20 43,935,491 43,945,599 Link
CDS sequence
ATGGACCCCGCAGGGGCAGCAGACCCCTCAGTGCCTCCCAATCCTTTGACTCACCTGAGCCTGCAGGACAGATCAGAGATGCAGCTGCAGAGCGAAGCCGACAGGCGGAGCCTCCCGGGCACTTGGACCAGGTCATCCCCAGAGCACACCACCATTCTGAGGGGAGGCGTGCGCAGGTGCCTGCAGCAACAGTGTGAACAGACTGTGCGGATCCTGCATGCCAAGGTGGCCCAGAAATCATACGGAAATGAGAAGCGGTTCTTCTGCCCCCCGCCCTGTGTCTACCTCTCGGGGCCTGGCTGGAGGGTGAAGCCAGGGCAGGATCAAGCTCACCAGGCGGGGGAAACGGGGCCCACGGTCTGCGGTTACATGGGACTGGACAGCGCGTCCGGCAGCGCCACTGAGACGCAGAAGCTGAATTTCGAGCAGCAGCCGGACTCCAGGGAATTCGGCTGCGCCAAGACCCTGTACATCTCAGATGCAGACAAGAGGAAGCACTTTCGGCTGGTGCTGCGGCTGGTGCTGCGCGGGGGCCGGGAGCTGGGTACCTTCCACAGCCGCCTTATCAAGGTCATCTCGAAGCCCTCGCAGAAGAAGCAGTCGCTGAAAAACACCGATCTGTGCATATCCTCCGGCTCAAAGGTCTCCCTCTTCAACCGCCTGCGCTCTCAGACGGTCTCCACACGCTACCTCTCTGTGGAGGATGGGGCCTTTGTGGCCAGTGCACGACAGTGGGCTGCCTTCACGCTCCACCTGGCTGATGGGCACTCTGCCCAAGGAGACTTCCCACCGCGAGAGGGCTACGTTCGCTATGGCTCCCTGGTGCAGCTCGTCTGCACGGTCACCGGCATCACACTACCTCCCATGATCATCCGTAAAGTAGCAAAACAGTGTGCGCTCCTTGATGTGGATGAGCCCATCTCCCAGCTGCACAAGTGTGCATTCCAGTTTCCAGGCAGTCCCCCAGGAGGGGGTGGCACCTACTTATGCCTTGCCACAGAGAAGGTGGTGCAATTTCAGGCCTCTCCCTGCCCCAAGGAGGCGAACAGGGCTCTGCTTAACGACAGCTCTTGCTGGACCATCATCGGCACCGAGTCGGTGGAATTTTCCTTCAGCACCAGCCTGGCGTGTACCCTGGAGCCGGTCACTCCGGTGCCTCTCATCAGCACCCTAGAGCTGAGCGGCGGGGGCGACGTGGCCACGCTGGAGCTCCACGGAGAGAACTTCCACGCGGGGCTCAAGGTGTGGTTTGGGGACGTGGAGGCAGAAACCATGTACAGCCCGCGGTCCCTGGTGTGCGTGGTGCCGGACGTGGCGGCCTTCTGCAGCGACTGGCGCTGGCTGCGCGCTCCCATCACAATCCCCATGAGCCTGGTGCGCGCCGACGGGCTCTTCTACCCTAGTGCCTTCTCCTTCACCTACACCCCGGAATACAGCGTGCGGCCGGGTCACCCCGGCGTCCCCGAGCCCGCCACCGACGCCGACGCGCTCCTGGAGAGCATCCATCAGGAGTTCACGCGCACCAACTTCCACCTCTTCATCCAGACTTAG
Amino sequence
MDPAGAADPSVPPNPLTHLSLQDRSEMQLQSEADRRSLPGTWTRSSPEHTTILRGGVRRCLQQQCEQTVRILHAKVAQKSYGNEKRFFCPPPCVYLSGPGWRVKPGQDQAHQAGETGPTVCGYMGLDSASGSATETQKLNFEQQPDSREFGCAKTLYISDADKRKHFRLVLRLVLRGGRELGTFHSRLIKVISKPSQKKQSLKNTDLCISSGSKVSLFNRLRSQTVSTRYLSVEDGAFVASARQWAAFTLHLADGHSAQGDFPPREGYVRYGSLVQLVCTVTGITLPPMIIRKVAKQCALLDVDEPISQLHKCAFQFPGSPPGGGGTYLCLATEKVVQFQASPCPKEANRALLNDSSCWTIIGTESVEFSFSTSLACTLEPVTPVPLISTLELSGGGDVATLELHGENFHAGLKVWFGDVEAETMYSPRSLVCVVPDVAAFCSDWRWLRAPITIPMSLVRADGLFYPSAFSFTYTPEYSVRPGHPGVPEPATDADALLESIHQEFTRTNFHLFIQT*