ENST00000517900.5 GTF2H2

Information
Transcript ID
ENST00000517900.5
Genome
hg38
Position
chr5:71,035,582-71,067,652
Strand
-
CDS length
372
Amino acid length
124
Gene symbol
GTF2H2
Gene type
protein-coding
Gene description
general transcription factor IIH subunit 2
Gene Entrez Gene ID
2966
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 71,035,582 71,035,684
7 71,059,690 71,059,744
6 71,060,120 71,060,170
5 71,060,844 71,060,930
4 71,061,272 71,061,308
3 71,061,688 71,061,765
2 71,062,708 71,062,796
1 71,067,494 71,067,652
CDS
Exon number Type Start Stop
8 CDS 71,035,677 71,035,684
7 CDS 71,059,690 71,059,744
6 CDS 71,060,120 71,060,170
5 CDS 71,060,844 71,060,930
4 CDS 71,061,272 71,061,308
3 CDS 71,061,688 71,061,765
2 CDS 71,062,708 71,062,763
Other genome
Genome Chromosome Start End Links
hg19 chr5 70,331,409 70,363,479 Link
CDS sequence
ATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAGGAGGCTATGAAAGAACATGGGAGATTCTTAAAGAAGATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGAGAAAAAGAGTATTTGAGCACCATGGACAAGTTCGACTTGGAATGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACTTTAAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCTGAAAAATTGACTGAACTTTCAGGTGTTTGA
Amino sequence
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGV*