ENST00000399017.6 TTC3

Information
Transcript ID
ENST00000399017.6
Genome
hg38
Position
chr21:37,081,596-37,203,112
Strand
+
CDS length
6,078
Amino acid length
2,026
Gene symbol
TTC3
Gene type
protein-coding
Gene description
tetratricopeptide repeat domain 3
Gene Entrez Gene ID
7267
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 37,081,596 37,084,331
2 37,087,247 37,087,401
3 37,087,833 37,087,875
4 37,088,196 37,088,346
5 37,088,799 37,088,886
6 37,090,233 37,090,286
7 37,091,293 37,091,413
8 37,094,005 37,094,090
9 37,095,350 37,095,444
10 37,096,581 37,096,643
11 37,108,392 37,108,446
12 37,121,817 37,121,979
13 37,122,983 37,123,028
14 37,124,619 37,124,742
15 37,126,080 37,126,143
16 37,129,003 37,129,063
17 37,132,682 37,132,766
18 37,135,380 37,135,514
19 37,138,634 37,138,714
20 37,140,561 37,140,673
21 37,144,525 37,144,645
22 37,147,481 37,147,603
23 37,148,546 37,148,647
24 37,150,078 37,150,170
25 37,150,820 37,150,884
26 37,151,893 37,152,029
27 37,152,951 37,153,277
28 37,156,655 37,156,906
29 37,159,699 37,159,745
30 37,160,802 37,160,858
31 37,161,990 37,162,063
32 37,164,051 37,164,215
33 37,165,550 37,166,615
34 37,167,555 37,167,620
35 37,172,595 37,172,744
36 37,182,774 37,182,913
37 37,185,706 37,185,774
38 37,187,049 37,187,145
39 37,188,495 37,188,595
40 37,191,334 37,191,424
41 37,192,112 37,192,213
42 37,195,675 37,196,036
43 37,197,570 37,197,696
44 37,197,882 37,198,025
45 37,200,232 37,200,324
46 37,201,440 37,203,112
CDS
Exon number Type Start Stop
2 CDS 37,087,258 37,087,401
3 CDS 37,087,833 37,087,875
4 CDS 37,088,196 37,088,346
5 CDS 37,088,799 37,088,886
6 CDS 37,090,233 37,090,286
7 CDS 37,091,293 37,091,413
8 CDS 37,094,005 37,094,090
9 CDS 37,095,350 37,095,444
10 CDS 37,096,581 37,096,643
11 CDS 37,108,392 37,108,446
12 CDS 37,121,817 37,121,979
13 CDS 37,122,983 37,123,028
14 CDS 37,124,619 37,124,742
15 CDS 37,126,080 37,126,143
16 CDS 37,129,003 37,129,063
17 CDS 37,132,682 37,132,766
18 CDS 37,135,380 37,135,514
19 CDS 37,138,634 37,138,714
20 CDS 37,140,561 37,140,673
21 CDS 37,144,525 37,144,645
22 CDS 37,147,481 37,147,603
23 CDS 37,148,546 37,148,647
24 CDS 37,150,078 37,150,170
25 CDS 37,150,820 37,150,884
26 CDS 37,151,893 37,152,029
27 CDS 37,152,951 37,153,277
28 CDS 37,156,655 37,156,906
29 CDS 37,159,699 37,159,745
30 CDS 37,160,802 37,160,858
31 CDS 37,161,990 37,162,063
32 CDS 37,164,051 37,164,215
33 CDS 37,165,550 37,166,615
34 CDS 37,167,555 37,167,620
35 CDS 37,172,595 37,172,744
36 CDS 37,182,774 37,182,913
37 CDS 37,185,706 37,185,774
38 CDS 37,187,049 37,187,145
39 CDS 37,188,495 37,188,595
40 CDS 37,191,334 37,191,424
41 CDS 37,192,112 37,192,213
42 CDS 37,195,675 37,196,036
43 CDS 37,197,570 37,197,696
44 CDS 37,197,882 37,198,025
45 CDS 37,200,232 37,200,324
46 CDS 37,201,440 37,201,574
Other genome
Genome Chromosome Start End Links
hg19 chr21 38,453,896 38,575,413 Link
CDS sequence
ATGGACAATTTTGCTGAGGGAGATTTCACTGTGGCGGATTATGCCTTGTTAGAAGATTGCCCTCACGTGGATGATTGTGTCTTTGCTGCTGAATTTATGAGCAATGATTATGTTCGTGTGACTCAGCTTTACTGTGATGGGGTGGGTGTGCAATATAAAGATTATATCCAAAGTGAGAGGAATTTGGAATTTGACATCTGCAGTATATGGTGTAGTAAACCAATTTCTGTCCTGCAAGATTATTGCGATGCCATTAAAATAAACATCTTCTGGCCACTTCTGTTTCAACATCAAAACAGTTCCGTAATATCACGATTGCATCCCTGTGTGGACGCCAACAATTCACGTGCTTCTGAGATAAATTTGAAGAAACTACAACATCTTGAGTTGATGGAAGATATTGTGGATTTGGCAAAGAAAGTTGCTAATGATTCATTCCTTATTGGAGGCTTATTGAGAATTGGTTGTAAAATAGAAAATAAAATCTTGGCAATGGAAGAAGCTCTGAATTGGATAAAATATGCAGGCGATGTAACAATTCTAACTAAATTAGGATCAATTGACAATTGTTGGCCTATGTTAAGTATTTTCTTTACTGAATACAAGTACCACATAACTAAAATTGTAATGGAAGACTGCAATTTGCTTGAAGAACTTAAAACTCAAAGTTGTATGGATTGTATAGAGGAAGGAGAACTAATGAAAATGAAAGGAAATGAAGAGTTTTCCAAAGAAAGATTTGATATAGCTATTATCTATTACACCAGAGCCATTGAATATAGACCTGAAAACTACCTTCTTTATGGTAACCGAGCTCTTTGTTTTCTTCGTACTGGACAGTTTAGAAATGCACTCGGTGATGGAAAGAGAGCCACTATTCTGAAGAACACTTGGCCAAAGGGTCATTATCGTTATTGTGATGCTCTTTCTATGCTGGGGGAATATGACTGGGCCCTGCAAGCAAACATAAAAGCTCAAAAACTCTGTAAAAATGACCCTGAGGGAATCAAGGATCTAATTCAGCAGCATGTAAAGTTACAAAAACAAATAGAAGACCTACAAGGTCGAACAGCAAATAAGGATCCAATTAAAGCCTTTTATGAAAACAGGGCCTACACACCTAGGAGTTTATCAGCACCTATATTTACTACTTCACTTAACTTTGTGGAGAAGGAAAGAGATTTCAGAAAAATTAATCACGAAATGGCCAACGGTGGTAATCAGAATCTAAAGGTGGCGGATGAGGCGTTGAAGGTAGATGATTGTGACTGTCATCCTGAATTTTCACCACCATCAAGTCAGCCTCCAAAACATAAAGGAAAACAAAAATCTCGAAACAATGAATCAGAAAAGTTCAGTTCTAGTTCACCATTGACTTTACCAGCAGATTTGAAGAACATCTTGGAGAAACAGTTTTCTAAATCTTCCAGAGCTGCACACCAGGATTTTGCTAATATAATGAAAATGCTGAGAAGCTTAATTCAAGATGGCTATATGGCCTTATTGGAGCAGCGTTGCCGCAGCGCTGCACAGGCCTTTACAGAGTTGCTGAACGGTTTAGATCCTCAAAAAATAAAGCAATTGAACCTGGCCATGATTAACTATGTTTTGGTCGTCTATGGACTTGCCATTTCTCTCCTTGGAATAGGACAGCCTGAGGAATTATCTGAAGCCGAAAACCAGTTTAAGAGGATTATTGAACACTACCCCAGTGAGGGCCTTGATTGCTTGGCCTACTGTGGAATTGGAAAAGTATATTTGAAAAAAAACAGATTTCTAGAAGCTCTCAATCACTTTGAGAAAGCAAGAACCTTGATTTATCGTCTTCCTGGAGTGTTAACTTGGCCCACGAGTAATGTGATTATTGAAGAGTCTCAGCCACAAAAAATAAAGATGCTGTTAGAGAAATTTGTTGAAGAATGCAAGTTCCCTCCAGTGCCAGATGCCATTTGTTGCTATCAGAAGTGCCATGGATATTCTAAGATCCAGATATACATAACTGATCCAGACTTTAAGGGTTTTATACGCATCAGCTGTTGCCAGTACTGTAAAATAGAATTTCACATGAATTGCTGGAAGAAGTTAAAAACTACAACCTTTAATGATAAAATTGACAAGGATTTTCTACAAGGAATATGTCTTACCCCTGACTGTGAAGGTGTCATTTCTAAGATTATCATCTTCAGCAGTGGTGGTGAAGTTAAATGTGAATTTGAACACAAGGTCATAAAAGAAAAGGTTCCTCCAAGACCTATTCTGAAACAGAAATGTTCTAGCCTAGAGAAACTAAGACTGAAAGAAGACAAAAAATTGAAGAGAAAGATCCAAAAAAAAGAAGCAAAAAAGTTAGCACAAGAAAGAATGGAGGAGGACTTAAGAGAAAGTAATCCACCCAAAAATGAAGAGCAGAAAGAAACTGTAGACAATGTTCAGCGTTGTCAGTTCCTTGATGACAGAATTCTACAGTGTATAAAGCAGTATGCTGACAAGATTAAATCCGGCATACAGAATACAGCCATGCTTCTCAAAGAATTGCTTTCTTGGAAAGTTTTGAGCACAGAAGACTATACAACCTGTTTTTCTAGCAGAAATTTTCTAAATGAAGCAGTGGACTATGTTATTCGCCACTTGATTCAAGAAAATAACAGAGTAAAGACAAGAATATTTCTGCATGTTTTGAGTGAGCTTAAAGAAGTGGAGCCCAAATTAGCCGCCTGGATCCAAAAACTTAATAGCTTTGGCTTAGATGCCACAGGAACTTTCTTTTCTCGTTATGGAGCATCTCTTAAACTGCTTGATTTTAGTATCATGACTTTCCTCTGGAATGAGAAATATGGTCACAAACTAGACTCTATAGAAGGAAAGCAACTTGATTATTTCTCTGAGCCAGCATCATTGAAGGAAGCCCGTTGTTTAATATGGCTGCTAGAAGAACACAGAGACAAGTTCCCAGCATTGCATAGTGCTTTAGATGAATTCTTTGATATAATGGACAGCCGCTGTACTGTGTTAAGGAAACAAGATAGTGGTGAAGCACCGTTTAGTTCAACCAAGGTGAAAAACAAAAGCAAGAAAAAGAAGCCAAAGGATTCAAAGCCTATGTTAGTTGGGTCTGGAACAACTTCAGTAACTTCAAATAATGAGATCATCACTTCAAGTGAAGACCATAGCAATCGAAATTCAGATTCTGCAGGCCCATTTGCAGTGCCTGACCATCTTCGGCAAGATGTAGAAGAATTCGAAGCTCTCTATGACCAACACAGTAACGAATATGTTGTCCGCAATAAGAAGCTATGGGACATGAACCCAAAACAAAAATGTTCAACTCTATATGATTACTTCTCTCAGTTTTTGGAGGAACATGGTCCCTTGGACATGAGTAACAAGATGTTCTCTGCAGAATATGAGTTTTTCCCAGAAGAAACTCGACAGATACTAGAAAAAGCAGGAGGTTTAAAACCTTTTCTCTTGGGATGCCCTCGTTTTGTTGTGATTGACAACTGTATTGCACTGAAGAAGGTTGCATCACGGCTCAAGAAAAAAAGGAAGAAGAAAAACATTAAAACAAAAGTAGAAGAAATTTCAAAAGCAGGGGAGTATGTACGAGTTAAACTACAACTGAATCCAGCTGCTAGGGAATTTAAACCAGATGTAAAGTCTAAACCAGTGTCAGATTCATCTTCAGCACCAGCTTTTGAAAATGTGAAACCCAAACCTGTGTCTGCAAATTCTCCCAAGCCAGCTTGTGAAGATGTGAAGGCCAAACCAGTATCCGACAATTCTTCTAGACAAGTTTCTGAGGATGGGCAACCCAAAGGGGTCTCTTCTAATTCTCCTAAACCAGGCTCTGAGGATGCAAATTACAAGCGAGTCTCCTGTAATTCCCCCAAACCGGTTCTTGAGGATGTGAAACCAACTTATTGGGCTCAATCCCATTTGGTCACAGGATACTGTACGTATCTTCCTTTCCAGAGATTTGATATCACCCAGACACCGCCAGCATACATAAACGTGTTACCAGGTTTGCCCCAGTACACCAGCATATATACACCCTTGGCCAGCCTTTCTCCTGAATATCAGCTACCAAGATCAGTACCAGTGGTGCCGTCTTTTGTAGCCAATGACAGAGCAGATAAAAATGCTGCTGCCTATTTTGAGGGTCATCATTTGAATGCTGAGAATGTTGCTGGTCACCAGATTGCCTCTGAAACACAGATCCTTGAGGGCTCTTTGGGAATATCTGTAAAGTCACACTGCAGCACAGGTGATGCTCATACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACACCAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAG
Amino sequence
MDNFAEGDFTVADYALLEDCPHVDDCVFAAEFMSNDYVRVTQLYCDGVGVQYKDYIQSERNLEFDICSIWCSKPISVLQDYCDAIKINIFWPLLFQHQNSSVISRLHPCVDANNSRASEINLKKLQHLELMEDIVDLAKKVANDSFLIGGLLRIGCKIENKILAMEEALNWIKYAGDVTILTKLGSIDNCWPMLSIFFTEYKYHITKIVMEDCNLLEELKTQSCMDCIEEGELMKMKGNEEFSKERFDIAIIYYTRAIEYRPENYLLYGNRALCFLRTGQFRNALGDGKRATILKNTWPKGHYRYCDALSMLGEYDWALQANIKAQKLCKNDPEGIKDLIQQHVKLQKQIEDLQGRTANKDPIKAFYENRAYTPRSLSAPIFTTSLNFVEKERDFRKINHEMANGGNQNLKVADEALKVDDCDCHPEFSPPSSQPPKHKGKQKSRNNESEKFSSSSPLTLPADLKNILEKQFSKSSRAAHQDFANIMKMLRSLIQDGYMALLEQRCRSAAQAFTELLNGLDPQKIKQLNLAMINYVLVVYGLAISLLGIGQPEELSEAENQFKRIIEHYPSEGLDCLAYCGIGKVYLKKNRFLEALNHFEKARTLIYRLPGVLTWPTSNVIIEESQPQKIKMLLEKFVEECKFPPVPDAICCYQKCHGYSKIQIYITDPDFKGFIRISCCQYCKIEFHMNCWKKLKTTTFNDKIDKDFLQGICLTPDCEGVISKIIIFSSGGEVKCEFEHKVIKEKVPPRPILKQKCSSLEKLRLKEDKKLKRKIQKKEAKKLAQERMEEDLRESNPPKNEEQKETVDNVQRCQFLDDRILQCIKQYADKIKSGIQNTAMLLKELLSWKVLSTEDYTTCFSSRNFLNEAVDYVIRHLIQENNRVKTRIFLHVLSELKEVEPKLAAWIQKLNSFGLDATGTFFSRYGASLKLLDFSIMTFLWNEKYGHKLDSIEGKQLDYFSEPASLKEARCLIWLLEEHRDKFPALHSALDEFFDIMDSRCTVLRKQDSGEAPFSSTKVKNKSKKKKPKDSKPMLVGSGTTSVTSNNEIITSSEDHSNRNSDSAGPFAVPDHLRQDVEEFEALYDQHSNEYVVRNKKLWDMNPKQKCSTLYDYFSQFLEEHGPLDMSNKMFSAEYEFFPEETRQILEKAGGLKPFLLGCPRFVVIDNCIALKKVASRLKKKRKKKNIKTKVEEISKAGEYVRVKLQLNPAAREFKPDVKSKPVSDSSSAPAFENVKPKPVSANSPKPACEDVKAKPVSDNSSRQVSEDGQPKGVSSNSPKPGSEDANYKRVSCNSPKPVLEDVKPTYWAQSHLVTGYCTYLPFQRFDITQTPPAYINVLPGLPQYTSIYTPLASLSPEYQLPRSVPVVPSFVANDRADKNAAAYFEGHHLNAENVAGHQIASETQILEGSLGISVKSHCSTGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRDPAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGNHAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFPCYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDVPVRIALGASSCEICHEVFKSKNVRVLKCGHKYHKGCFKQWLKGQSACPACQGRDLLTEESPSGRGWPSQNQELPSCSSR*