ENST00000642995.1 RNASEH2B
Information
- Transcript ID
- ENST00000642995.1
- Genome
- hg38
- Position
- chr13:50,910,070-50,956,567
- Strand
- +
- CDS length
- 822
- Amino acid length
- 274
- Gene symbol
- RNASEH2B
- Gene type
- protein-coding
- Gene description
- ribonuclease H2 subunit B
- Gene Entrez Gene ID
- 79621
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 50,910,070 | 50,910,140 |
2 | 50,927,407 | 50,927,478 |
3 | 50,930,683 | 50,930,759 |
4 | 50,934,885 | 50,934,999 |
5 | 50,943,330 | 50,943,394 |
6 | 50,945,427 | 50,945,532 |
7 | 50,947,987 | 50,948,068 |
8 | 50,949,463 | 50,949,505 |
9 | 50,953,905 | 50,953,985 |
10 | 50,956,358 | 50,956,567 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 50,910,077 | 50,910,140 |
2 | CDS | 50,927,407 | 50,927,478 |
3 | CDS | 50,930,683 | 50,930,759 |
4 | CDS | 50,934,885 | 50,934,999 |
5 | CDS | 50,943,330 | 50,943,394 |
6 | CDS | 50,945,427 | 50,945,532 |
7 | CDS | 50,947,987 | 50,948,068 |
8 | CDS | 50,949,463 | 50,949,505 |
9 | CDS | 50,953,905 | 50,953,985 |
10 | CDS | 50,956,358 | 50,956,474 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr13 | 51,484,206 | 51,530,703 | Link |
CDS sequence
ATGGCCGCTGGCGTGGACTGCGGGGACGGGGTTGGCGCCCGGCAGCACGTGTTCCTGGTTTCAGAATATTTAAAAGATGCTTCAAAGAAGATGAAAAATGGGCTAATGTTTGTAAAACTGGTTAACCCCTGTTCAGGAGGTCTTCTCCATTTTGCCACACCTGTGGATCCTCTATTTCTGCTTCTCCACTACCTCATAAAGGCTGATAAGGAGGGGAAGTTTCAGCCCCTTGATCAAGTTGTGGTGGATAACGTGTTTCCAAATTGCATCTTGTTGCTGAAACTTCCTGGACTTGAGAAGTTACTTCATCATGTGACAGAGGAAAAAGAAATAGACAACAAGAAATATTACAAGTACAGCAAAGAGAAGACATTAAAGTGGCTGGAAAAAAAGGTTAATCAAACTGTGGCAGCATTAAAAACCAATAATGTGAATGTCAGTTCCCGGGTACAGTCAACTGCATTTTTCTCTGGTGACCAAGCTTCCACTGACAAGGAAGAGGATTATATTCGTTATGCCCATGGTCTGATATCTGACTACATCCCTAAAGAATTAAGTGATGACTTATCTAAATACTTAAAGCTTCCAGAACCTTCAGCCTCATTGCCAAATCCTCCATCAAAGAAAATAAAGTTATCAGATGAGCCTGTAGAAGCAAAAGAAGATTACACTAAGTTTAATACTAAAGATTTGAAGACTGAAAAGAAAAATAGCAAAATGACTGCAGCTCAGAAGGCTTTGGCTAAAGTTGACAAGAGTGGAATGAAAAGTATTGATACCTTTTTTGGGGTAAAAAATAAAAAAAAAATTGGAAAGGTTTGA
Amino sequence
MAAGVDCGDGVGARQHVFLVSEYLKDASKKMKNGLMFVKLVNPCSGGLLHFATPVDPLFLLLHYLIKADKEGKFQPLDQVVVDNVFPNCILLLKLPGLEKLLHHVTEEKEIDNKKYYKYSKEKTLKWLEKKVNQTVAALKTNNVNVSSRVQSTAFFSGDQASTDKEEDYIRYAHGLISDYIPKELSDDLSKYLKLPEPSASLPNPPSKKIKLSDEPVEAKEDYTKFNTKDLKTEKKNSKMTAAQKALAKVDKSGMKSIDTFFGVKNKKKIGKV*