ENST00000480977.2 LGR4
Information
- Transcript ID
- ENST00000480977.2
- Genome
- hg38
- Position
- chr11:27,385,246-27,472,314
- Strand
- -
- CDS length
- 477
- Amino acid length
- 159
- Gene symbol
- LGR4
- Gene type
- protein-coding
- Gene description
- leucine rich repeat containing G protein-coupled receptor 4
- Gene Entrez Gene ID
- 55366
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 3 | 27,385,246 | 27,385,468 |
| 2 | 27,412,789 | 27,412,860 |
| 1 | 27,472,118 | 27,472,314 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 27,385,249 | 27,385,468 |
| 2 | CDS | 27,412,789 | 27,412,860 |
| 1 | CDS | 27,472,118 | 27,472,302 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 27,406,793 | 27,493,861 | Link |
CDS sequence
ATGCCGGGCCCGCTAGGGCTGCTCTGCTTCCTCGCCCTGGGGCTGCTCGGCTCGGCCGGGCCCAGCGGCGCGGCGCCGCCTCTCTGCGCGGCGCCCTGCAGCTGCGACGGCGACCGTCGGGTGGACTGCTCCGGGAAGGGGCTGACGGCCGTGCCCGAGGGGCTCAGCGCCTTCACCCAAGCGCTGGATATCAGTATGAACAACATTACTCAGTTGCCAGAAGATGCATTTAAGAACTTTCCTTTTCTAGAAGAGCTGCGTTTAGATGCCAACCATATTACCTCAGTCCCCGAGGACAGTTTTGAAGGACTTGTTCAGTTACGGCATCTGTGGCTGGATGACAACAGCTTGACGGAGGTGCCTGTGCACCCCCTCAGCAATCTGCCCACCCTACAGGCGCTGACCCTGGCTCTCAACAAGATCTCAAGCATCCCTGACTTTGCATTTACCAACCTTTCAAGCCTGGTAGTTCTGTAA
Amino sequence
MPGPLGLLCFLALGLLGSAGPSGAAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVL*