ENST00000368698.3 S100A1
Information
- Transcript ID
- ENST00000368698.3
- Genome
- hg38
- Position
- chr1:153,627,926-153,632,034
- Strand
- +
- CDS length
- 444
- Amino acid length
- 148
- Gene symbol
- S100A1
- Gene type
- protein-coding
- Gene description
- S100 calcium binding protein A1
- Gene Entrez Gene ID
- 6271
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 153,627,926 | 153,628,148 |
| 2 | 153,628,427 | 153,628,496 |
| 3 | 153,630,509 | 153,630,662 |
| 4 | 153,631,698 | 153,632,034 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 153,628,073 | 153,628,148 |
| 2 | CDS | 153,628,427 | 153,628,496 |
| 3 | CDS | 153,630,509 | 153,630,662 |
| 4 | CDS | 153,631,698 | 153,631,841 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr1 | 153,600,402 | 153,604,510 | Link |
CDS sequence
ATGGAGGAGCCACAGACTAAGACCCCCTCAGCAGAATTCCCCCCTTACCGGGCTCAACCAGCACAGCCAGCCACAGCTCCAGCAGCCACATTTGCAACCTTGGCCATCTGTCCAGAACCTGCTCCCACCTCAGGCCCAGGCCAACCGTGCACTGCTGCAATGGGCTCTGAGCTGGAGACGGCGATGGAGACCCTCATCAACGTGTTCCACGCCCACTCGGGCAAAGAGGGGGACAAGTACAAGCTGAGCAAGAAGGAGCTGAAAGAGCTGCTGCAGACGGAGCTCTCTGGCTTCCTGGATGCCCAGAAGGATGTGGATGCTGTGGACAAGGTGATGAAGGAGCTAGACGAGAATGGAGACGGGGAGGTGGACTTCCAGGAGTATGTGGTGCTTGTGGCTGCTCTCACAGTGGCCTGTAACAATTTCTTCTGGGAGAACAGTTGA
Amino sequence
MEEPQTKTPSAEFPPYRAQPAQPATAPAATFATLAICPEPAPTSGPGQPCTAAMGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAALTVACNNFFWENS*