ENST00000356891.4 RLIG1

Information
Transcript ID
ENST00000356891.4
Genome
hg38
Position
chr12:88,035,536-88,050,160
Strand
+
CDS length
978
Amino acid length
326
Gene symbol
RLIG1
Gene type
protein-coding
Gene description
RNA 5'-phosphate and 3'-OH ligase 1
Gene Entrez Gene ID
91298
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 88,035,536 88,035,738
2 88,040,148 88,040,265
3 88,042,825 88,042,920
4 88,043,599 88,043,715
5 88,045,582 88,045,779
6 88,046,807 88,046,976
7 88,048,234 88,050,160
CDS
Exon number Type Start Stop
1 CDS 88,035,649 88,035,738
2 CDS 88,040,148 88,040,265
3 CDS 88,042,825 88,042,920
4 CDS 88,043,599 88,043,715
5 CDS 88,045,582 88,045,779
6 CDS 88,046,807 88,046,976
7 CDS 88,048,234 88,048,422
Other genome
Genome Chromosome Start End Links
hg19 chr12 88,429,313 88,443,937 Link
CDS sequence
ATGAAGCGCTTGGGCTCCGTGCAGCGGAAAATGCCGTGTGTGTTTGTGACGGAGGTGAAAGAGGAGCCTTCCTCCAAAAGGGAGCATCAGCCATTTAAAGTTTTGGCAACTGAAACTGTAAGTCACAAGGCATTAGATGCAGATATATACAGTGCAATTCCAACAGAAAAAGTGGATGGAACATGTTGTTATGTTACTACCTATAAAGATCAGCCATACCTTTGGGCTCGACTAGATAGAAAACCCAACAAACAAGCTGAAAAAAGATTTAAAAATTTTCTACATTCAAAAGAAAACCCAAAAGAATTTTTTTGGAACGTTGAGGAGGACTTCAAACCAGCTCCGGAGTGCTGGATACCAGCAAAGGAGACAGAACAAATAAATGGGAACCCAGTGCCTGATGAAAATGGACACATTCCTGGTTGGGTACCAGTAGAGAAAAACAACAAACAGTATTGCTGGCATTCCTCTGTAGTTAATTATGAATTTGAAATTGCCCTGGTACTAAAACATCATCCTGATGATTCTGGACTTTTGGAAATTAGTGCAGTGCCACTTTCAGATCTCTTAGAACAAACACTGGAACTCATAGGAACAAATATCAATGGAAACCCATATGGGTTAGGGAGCAAGAAACATCCATTACATCTTCTTATACCACATGGAGCATTTCAAATAAGAAATCTACCTTCATTGAAGCACAATGATCTCGTGTCCTGGTTTGAAGATTGCAAAGAGGGTAAAATTGAAGGAATAGTGTGGCATTGCAGTGATGGCTGTTTAATAAAGGTCCATCGCCATCATCTTGGCTTATGCTGGCCAATTCCAGATACTTACATGAATTCAAGACCAGTTATTATCAACATGAACCTGAACAAATGTGACTCTGCCTTTGATATTAAGTGTTTGTTTAATCATTTTTTAAAAATAGATAATCAGAAATTTGTTAGACTCAAAGATATAATATTTGATGTATAA
Amino sequence
MKRLGSVQRKMPCVFVTEVKEEPSSKREHQPFKVLATETVSHKALDADIYSAIPTEKVDGTCCYVTTYKDQPYLWARLDRKPNKQAEKRFKNFLHSKENPKEFFWNVEEDFKPAPECWIPAKETEQINGNPVPDENGHIPGWVPVEKNNKQYCWHSSVVNYEFEIALVLKHHPDDSGLLEISAVPLSDLLEQTLELIGTNINGNPYGLGSKKHPLHLLIPHGAFQIRNLPSLKHNDLVSWFEDCKEGKIEGIVWHCSDGCLIKVHRHHLGLCWPIPDTYMNSRPVIINMNLNKCDSAFDIKCLFNHFLKIDNQKFVRLKDIIFDV*