ENST00000216106.6 HMGXB4

Information
Transcript ID
ENST00000216106.6
Genome
hg38
Position
chr22:35,257,493-35,295,807
Strand
+
CDS length
1,806
Amino acid length
602
Gene symbol
HMGXB4
Gene type
protein-coding
Gene description
HMG-box containing 4
Gene Entrez Gene ID
10042
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 35,257,493 35,257,557
2 35,262,323 35,262,421
3 35,263,078 35,263,226
4 35,263,796 35,263,874
5 35,264,648 35,265,603
6 35,283,962 35,284,043
7 35,285,997 35,286,061
8 35,287,347 35,287,452
9 35,288,238 35,288,407
10 35,292,992 35,293,114
11 35,293,607 35,295,807
CDS
Exon number Type Start Stop
2 CDS 35,262,391 35,262,421
3 CDS 35,263,078 35,263,226
4 CDS 35,263,796 35,263,874
5 CDS 35,264,648 35,265,603
6 CDS 35,283,962 35,284,043
7 CDS 35,285,997 35,286,061
8 CDS 35,287,347 35,287,452
9 CDS 35,288,238 35,288,407
10 CDS 35,292,992 35,293,114
11 CDS 35,293,607 35,293,651
Other genome
Genome Chromosome Start End Links
hg19 chr22 35,653,486 35,691,800 Link
CDS sequence
ATGGCTTATGATGACTCCGTGAAGAAAGAAGATTGTTTTGATGGTGATCATACCTTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAACGAGAGAAAAAACGTTCTTACAAAGATTTTTTAAGGGAAGAGGAAGAAATTGCTGCTCAGGTCAGGAATTCTTCCAAGAAGAAGTTGAAGGATAGTGAACTTTACTTCTTGGGGACGGACACACACAAGAAGAAGAGGAAGCACTCCTCTGATGATTACTACTATGGAGATATTTCGTCTTTGGAATCGTCACAGAAGAAAAAGAAAAAGTCCAGCCCACAGTCTACTGATACAGCTATGGACCTGTTGAAAGCTATCACTTCCCCACTGGCAGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGAGAAATCCTCTGGCTCTTCAAGCCATTCGGAGAGTAAAAAGGAGCACCACAGGAAGAAAGTCAGTGGAAGCAGTGGGGAACTACCCCTAGAGGATGGTGGCTCCCACAAATCGAAAAAAATGAAACCTCTCTATGTGAACACAGAGACACTGACCCTTCGGGAGCCTGATGGTTTAAAAATGAAACTTATTCTGTCACCAAAGGAGAAGGGAAGCAGCTCTGTTGATGAGGAGTCTTTTCAATATCCCTCCCAACAAGCGACTGTGAAAAAATCCTCAAAGAAATCAGCTCGGGATGAGCAGGGTGCTTTACTCCTAGGACATGAGTTACAGAGCTTTCTGAAAACAGCCCGGAAAAAGCACAAGTCATCCTCAGACGCACATTCATCTCCTGGCCCTGAAGGCTGTGGGTCTGACGCCTCCCAGTTCGCAGAGTCCCACAGTGCTAACCTTGATCTTTCAGGGCTTGAACCTATTCTGGTAGAATCAGACTCATCCTCTGGTGGGGAACTAGAGGCTGGGGAGTTAGTGATAGATGATTCTTACCGAGAAATCAAGAAGAAAAAGAAGTCAAAGAAGAGCAAAAAGAAGAAAGACAAGGAGAAGCATAAAGAGAAGCGACACTCCAAGTCCAAGAGAAGTTTAGGACTTTCTGCCGTGCCAGTGGGAGAGGTCACAGTGACATCTGGCCCTCCTCCCAGCATCCCATACGCTGGAGCAGCAGCACCTCCCCTGCCACTTCCTGGCCTCCACACAGATGGGCATAGTGAAAAAAAAAAGAAAAAAGAAGAGAAGGACAAAGAGAGAGAGAGAGGAGAAAAGCCAAAAAAGAAGAACATGTCGGCCTACCAGGTGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATTTTGGGGAACTTAGTAAAAAACTGGCTGAGGTGTGGAAGCAATTACCAGAAAAAGACAAACTGATTTGGAAGCAAAAAGCTCAGTATCTGCAGCACAAACAGAACAAAGCAGAAGCCACAACTGTGAAAAGGAAAGCATCCAGCTCAGAAGGTTCCATGAAAGTCAAAGCCTCTTCTGTAGGAGTACTGTCACCCCAGAAGAAGTCCCCACCCACCACCATGCTGTTACCAGCCTCACCAGCCAAAGCCCCTGAGACAGAGCCCATTGATGTTGCTGCTCATCTTCAGCTGTTGGGAGAGTCCCTAAGCCTCATTGGACACCGTCTGCAGGAAACTGAGGGTATGGTGGCTGTGTCTGGCAGTTTGTCAGTGCTTCTGGATTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGAATTGAATGGCTGTCCCAAACAGGTCTTGTCAAACACATTAGACAACATTGCTTACATCATGCCGGGACTGTGA
Amino sequence
MAYDDSVKKEDCFDGDHTFEDIGLAAGRSQREKKRSYKDFLREEEEIAAQVRNSSKKKLKDSELYFLGTDTHKKKRKHSSDDYYYGDISSLESSQKKKKKSSPQSTDTAMDLLKAITSPLAAGSKPSKKTGEKSSGSSSHSESKKEHHRKKVSGSSGELPLEDGGSHKSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVDEESFQYPSQQATVKKSSKKSARDEQGALLLGHELQSFLKTARKKHKSSSDAHSSPGPEGCGSDASQFAESHSANLDLSGLEPILVESDSSSGGELEAGELVIDDSYREIKKKKKSKKSKKKKDKEKHKEKRHSKSKRSLGLSAVPVGEVTVTSGPPPSIPYAGAAAPPLPLPGLHTDGHSEKKKKKEEKDKERERGEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSSEGSMKVKASSVGVLSPQKKSPPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL*