ENST00000649752.1 HDAC8
Information
- Transcript ID
- ENST00000649752.1
- Genome
- hg38
- Position
- chrX:72,457,621-72,572,843
- Strand
- -
- CDS length
- 780
- Amino acid length
- 260
- Gene symbol
- HDAC8
- Gene type
- protein-coding
- Gene description
- histone deacetylase 8
- Gene Entrez Gene ID
- 55869
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
7 | 72,457,621 | 72,462,098 |
6 | 72,464,559 | 72,464,731 |
5 | 72,488,933 | 72,489,041 |
4 | 72,490,929 | 72,491,006 |
3 | 72,495,156 | 72,495,268 |
2 | 72,572,057 | 72,572,109 |
1 | 72,572,651 | 72,572,843 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
7 | CDS | 72,461,956 | 72,462,098 |
6 | CDS | 72,464,559 | 72,464,731 |
5 | CDS | 72,488,933 | 72,489,041 |
4 | CDS | 72,490,929 | 72,491,006 |
3 | CDS | 72,495,156 | 72,495,268 |
2 | CDS | 72,572,057 | 72,572,109 |
1 | CDS | 72,572,651 | 72,572,761 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chrX | 71,677,471 | 71,792,693 | Link |
CDS sequence
ATGGAGGAGCCGGAGGAACCGGCGGACAGTGGGCAGTCGCTGGTCCCGGTTTATATCTATAGTCCCGAGTATGTCAGTATGTGTGACTCCCTGGCCAAGATCCCCAAACGGGCCAGTATGGTGCATTCTTTGATTGAAGCATATGCACTGCATAAGCAGATGAGAGATGAAGCATCTGGTTTTTGTTATCTCAATGATGCTGTCCTGGGAATATTACGATTGCGACGGAAATTTGAGCGTATTCTCTACGTGGATTTGGATCTGCACCATGGAGATGGTGTAGAAGACGCATTCAGTTTCACCTCCAAAGTCATGACCGTGTCCCTGCACAAATTCTCCCCAGGATTTTTCCCAGGAACAGGTGACGTGTCTGATGTTGGCCTAGGGAAGGGACGGTACTACAGTGTAAATGTGCCCATTCAGGATGGCATACAAGATGAAAAATATTACCAGATCTGTGAAAGTGTACTAAAGGAAGTATACCAAGCCTTTAATCCCAAAGCAGTGGTCTTACAGCTGGGAGCTGACACAATAGCTGGGGATCCCATGTGCTCCTTTAACATGACTCCAGTGGGAATTGGCAAGTGTCTTAAGTACATCCTTCAATGGCAGTTGGCAACACTCATTTTGGGAGGAGGAGGCTATAACCTTGCCAACACGGCTCGATGCTGGACATACTTGACCGGGGTCATCCTAGGGAAAACACTATCCTCTGAGATCCCAGATCATGAGGTAAGTAAGGCTCTGACAAGTCCTCTCTTCTTTAAGGGGAAGAGCTGA
Amino sequence
MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEVSKALTSPLFFKGKS*