ENST00000592885.5 APOC1

Information
Transcript ID
ENST00000592885.5
Genome
hg38
Position
chr19:44,914,703-44,919,344
Strand
+
CDS length
390
Amino acid length
130
Gene symbol
APOC1
Gene type
protein-coding
Gene description
apolipoprotein C1
Gene Entrez Gene ID
341
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 44,914,703 44,914,733
2 44,914,872 44,914,949
3 44,916,190 44,916,470
4 44,919,173 44,919,344
CDS
Exon number Type Start Stop
2 CDS 44,914,892 44,914,949
3 CDS 44,916,190 44,916,470
4 CDS 44,919,173 44,919,223
Other genome
Genome Chromosome Start End Links
hg19 chr19 45,417,960 45,422,601 Link
CDS sequence
ATGAGGCTCTTCCTGTCGCTCCCGGTCCTGGTGGTGGTTCTGTCGATCGTCTTGGAAGGCCCAGCCCCAGCCCAGGGGACCCCAGACGTCTCCAGTGCCTTGGATAAGCTGAAGGAGTTTGGAAACACACTGGAGGACAAGGCTCGGGAACTCATCAGCCGCATCAAACAGAGTGAACTTTCTGCCAAGATGCGGTTAGAACCCTTCCCAGGGCACGGGAGAGCTGGGGTGTGTTTTTGGGTGGAGCCCTGGCAGATGGTCCAAGATGAACAGATTGAAAAAAAAACAAGTCCTGGAGAGGCTGACAACATCCCTCTGGTCACACAGCTAGATCTCAAGGGAGTGGTTTTCAGAGACATTTCAGAAAGTGAAGGAGAAACTCAAGATTGA
Amino sequence
MRLFLSLPVLVVVLSIVLEGPAPAQGTPDVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMRLEPFPGHGRAGVCFWVEPWQMVQDEQIEKKTSPGEADNIPLVTQLDLKGVVFRDISESEGETQD*