ENST00000444911.6 PLXDC1

Information
Transcript ID
ENST00000444911.6
Genome
hg38
Position
chr17:39,067,160-39,152,699
Strand
-
CDS length
1,383
Amino acid length
461
Gene symbol
PLXDC1
Gene type
protein-coding
Gene description
plexin domain containing 1
Gene Entrez Gene ID
57125
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
13 39,067,160 39,067,959
12 39,069,856 39,070,016
11 39,072,450 39,072,485
10 39,077,913 39,078,048
9 39,079,104 39,079,164
8 39,083,459 39,083,540
7 39,087,607 39,087,702
6 39,105,854 39,105,953
5 39,107,407 39,107,525
4 39,108,123 39,108,245
3 39,108,904 39,108,973
2 39,109,248 39,109,391
1 39,152,546 39,152,699
CDS
Exon number Type Start Stop
13 CDS 39,067,840 39,067,959
12 CDS 39,069,856 39,070,016
11 CDS 39,072,450 39,072,485
10 CDS 39,077,913 39,078,048
9 CDS 39,079,104 39,079,164
8 CDS 39,083,459 39,083,540
7 CDS 39,087,607 39,087,702
6 CDS 39,105,854 39,105,953
5 CDS 39,107,407 39,107,525
4 CDS 39,108,123 39,108,245
3 CDS 39,108,904 39,108,973
2 CDS 39,109,248 39,109,391
1 CDS 39,152,546 39,152,680
Other genome
Genome Chromosome Start End Links
hg19 chr17 37,223,413 37,308,952 Link
CDS sequence
ATGGCGCTCAGCGTTCGCACCCTTCCTCTCCGCGGTTTTCTAGTCCCTAGGCCCCAGCCCACTAGAAGCCAGGATGCCCCCTCACCCCGTCTCCCACTCTCCAGCGCCCCAGCTCCTTGCCGTCACAAGAACGAAGAGGACAACCACAGCTATTATGTGTCCCGTCTCTATGGCCCCAGCGAGCCCCACAGCCGGGAACTGTGGGTAGATGTGGCCGAGGCCAACCGGAGCCAAGTGAAGATCCACACAATACTCTCCAACACCCACCGGCAGGCTTCGAGAGTGGTCTTGTCCTTTGATTTCCCTTTCTACGGGCATCCTCTGCGGCAGATCACCATAGCAACTGGAGGCTTCATCTTCATGGGGGACGTGATCCATCGGATGCTCACAGCTACTCAGTATGTGGCGCCCCTGATGGCCAACTTCAACCCTGGCTACTCCGACAACTCCACAGTTGTTTACTTTGACAATGGGACAGTCTTTGTGGTTCAGTGGGACCACGTTTATCTCCAAGGCTGGGAAGACAAGGGCAGTTTCACCTTCCAGGCAGCTCTGCACCATGACGGCCGCATTGTCTTTGCCTATAAAGAGATCCCTATGTCTGTCCCGGAAATCAGCTCCTCCCAGCATCCTGTCAAAACCGGCCTATCGGATGCCTTCATGATTCTCAATCCATCCCCGGATGTGCCAGAATCTCGGCGAAGGAGCATCTTTGAATATCACCGCATAGAGCTGGACCCCAGCAAGGTCACCAGCATGTCGGCCGTGGAGTTCACCCCATTGCCGACCTGCCTGCAGCATAGGAGCTGTGACGCCTGCATGTCCTCAGACCTGACCTTCAACTGCAGCTGGTGCCATGTCCTCCAGAGATGCTCCAGTGGCTTTGACCGCTATCGCCAGGAGTGGATGGACTATGGCTGTGCACAGGAGGCAGAGGGCAGGATGTGCGAGGACTTCCAGGATGAGGACCACGACTCAGCCTCCCCTGACACTTCCTTCAGCCCCTATGATGGAGACCTCACCACTACCTCCTCCTCCCTCTTCATCGACAGCCTCACCACAGAAGATGACACCAAGTTGAATCCCTATGCAGGAGGAGACGGCCTTCAGAACAACCTGTCCCCCAAGACAAAGGGCACTCCTGTGCACCTGGGCACCATCGTGGGCATCGTGCTGGCAGTCCTCCTCGTGGCGGCCATCATCCTGGCTGGAATTTACATCAATGGCCACCCCACATCCAATGCTGCGCTCTTCTTCATCGAGCGTAGACCTCACCACTGGCCAGCCATGAAGTTTCGCAGCCACCCTGACCATTCCACCTATGCGGAGGTGGAGCCCTCGGGCCATGAGAAGGAGGGCTTCATGGAGGCTGAGCAGTGCTGA
Amino sequence
MALSVRTLPLRGFLVPRPQPTRSQDAPSPRLPLSSAPAPCRHKNEEDNHSYYVSRLYGPSEPHSRELWVDVAEANRSQVKIHTILSNTHRQASRVVLSFDFPFYGHPLRQITIATGGFIFMGDVIHRMLTATQYVAPLMANFNPGYSDNSTVVYFDNGTVFVVQWDHVYLQGWEDKGSFTFQAALHHDGRIVFAYKEIPMSVPEISSSQHPVKTGLSDAFMILNPSPDVPESRRRSIFEYHRIELDPSKVTSMSAVEFTPLPTCLQHRSCDACMSSDLTFNCSWCHVLQRCSSGFDRYRQEWMDYGCAQEAEGRMCEDFQDEDHDSASPDTSFSPYDGDLTTTSSSLFIDSLTTEDDTKLNPYAGGDGLQNNLSPKTKGTPVHLGTIVGIVLAVLLVAAIILAGIYINGHPTSNAALFFIERRPHHWPAMKFRSHPDHSTYAEVEPSGHEKEGFMEAEQC*