ENST00000580299.2 CTC1

Information
Transcript ID
ENST00000580299.2
Genome
hg38
Position
chr17:8,227,826-8,248,058
Strand
-
CDS length
3,390
Amino acid length
1,130
Gene symbol
CTC1
Gene type
protein-coding
Gene description
CST telomere replication complex component 1
Gene Entrez Gene ID
80169
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
21 8,227,826 8,228,319
20 8,228,503 8,228,629
19 8,229,335 8,229,446
18 8,229,891 8,229,968
17 8,230,294 8,230,468
16 8,230,563 8,230,651
15 8,231,276 8,231,469
14 8,231,726 8,231,815
13 8,231,903 8,232,227
12 8,232,361 8,232,475
11 8,232,906 8,233,032
10 8,234,455 8,234,655
9 8,234,749 8,234,926
8 8,235,053 8,235,285
7 8,235,831 8,235,959
6 8,236,058 8,236,342
5 8,237,375 8,237,519
4 8,238,031 8,238,242
3 8,238,392 8,238,629
2 8,242,985 8,243,148
1 8,248,004 8,248,058
CDS
Exon number Type Start Stop
21 CDS 8,228,180 8,228,319
20 CDS 8,228,503 8,228,629
19 CDS 8,229,335 8,229,446
18 CDS 8,229,891 8,229,968
17 CDS 8,230,294 8,230,468
16 CDS 8,230,563 8,230,651
15 CDS 8,231,276 8,231,469
14 CDS 8,231,726 8,231,815
13 CDS 8,231,903 8,232,227
12 CDS 8,232,361 8,232,475
11 CDS 8,232,906 8,233,032
10 CDS 8,234,455 8,234,655
9 CDS 8,234,749 8,234,926
8 CDS 8,235,053 8,235,285
7 CDS 8,235,831 8,235,959
6 CDS 8,236,058 8,236,342
5 CDS 8,237,375 8,237,519
4 CDS 8,238,031 8,238,242
3 CDS 8,238,392 8,238,629
2 CDS 8,242,985 8,243,148
1 CDS 8,248,004 8,248,036
Other genome
Genome Chromosome Start End Links
hg19 chr17 8,131,144 8,151,376 Link
CDS sequence
ATGGCGGCTGGCCGGGCCCAGGTCCCTTCCTCCGAACAAGCCTGGCTTGAGGATGCTCAGGTCTTCATCCAAAAGACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGTAATTGATTGTGTGAAGACTGTCTGGTTGTCCCAGGGAAGGAACCAAGGTTCTACACTGCCCCTCAGCTATAGCTTCGTCTCAGTACAGGACCTCAAGACTCACCAGCGTCTCCCATGCTGCAGCCACCTGTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTGCCCCGAGAGCAGCTGTTACTTTTAGGGACACTAACAGACCTATCGGCAGACTTGGAACAAGAGTGCAGGAACGGAAGCCTCTATGTGAGAGATAACACTGGCGTCCTGAGCTGTGAGCTCATAGACCTGGACCTTTCTTGGTTGGGCCATCTTTTTCTGTTCCCCCGTTGGAGTTACCTCCCTCCTGCCAGGTGGAATTCCTCAGGGGAAGGGCACTTGGAGCTGTGGGATGCCCCTGTGCCAGTGTTTCCTTTGACCATCAGTCCTGGCCCCGTCACGCCTATCCCTGTCCTCTACCCAGAGAGTGCTTCCTGCCTGCTCAGGCTCAGAAACAAGCTCAGAGGTGTGCAGCGAAACCTGGCTGGGAGTCTAGTTCGATTGAGTGCTCTGGTGAAAAGTAAACAGAAAGCTTACTTCATCCTGTCTCTTGGTAGATCACACCCAGCTGTCACCCACGTGTCCATCATCGTGCAGGTCCCTGCCCAGCTGGTGTGGCACAGAGCCCTTCGGCCTGGTACAGCCTATGTGCTGACAGAACTGCGAGTGTCCAAGATCCGTGGTCAGCGCCAGCATGTTTGGATGACCAGTCAGTCCTCCCGTCTGTTGCTGCTGAAACCAGAATGTGTGCAGGAGCTGGAACTGGAGCTGGAAGGACCCCTCTTAGAGGCTGACCCCAAGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCCGGTATTCTAGACTCCTATCCTATTCGGGAGCAGTCACTGGCGTGTTGAATGAGCCCGCTGGCCTCTATGAGCTGGATGGGCAGCTGGGGCTCTGCCTTGCCTACCAGCAGTTCCGTGGCCTTAGGCGGGTGATGCGACCTGGAGTGTGTCTGCAGCTCCAGGATGTTCACCTGCTCCAGTCAGTGGGAGGGGGGACAAGAAGGCCAGTGCTCGCCCCCTGCCTCCGTGGCGCCGTTCTGCTTCAAAGCTTCTCTCGTCAGAAGCCTGGGGCTCACTCATCCCGTCAAGCCTACGGGGCCTCCCTGTACGAGCAGCTGGTGTGGGAACGTCAGTTAGGACTTCCCCTCTACCTGTGGGCTACCAAGGCCCTGGAGGAGCTGGCCTGCAAGCTGTGTCCCCATGTGCTGAGACACCACCAGTTCCTGCAACATTCCTCTCCTGGGAGCCCCAGCCTGGGACTGCAACTCCTGGCTCCTACCCTGGATCTTCTAGCTCCGCCAGGCAGCCCTGTTCGGAATGCACACAATGAGATCCTTGAAGAGCCACATCACTGTCCCCTCCAGAAATACACTCGGCTGCAGACTCCCTCCTCCTTCCCCACTCTGGCCACCCTGAAAGAAGAAGGACAGCGTAAGGCCTGGGCCTCCTTTGACCCTAAGGCCCTTCTGCCCCTCCCGGAGGCCTCCTACCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTTGGTCCTGGCTCTGTCTGCTGCCCTCTGCCTTCTGCCCAGCCCAGGTTTTACTTGGGGTTCTGGTGGCTTCATCTCATAAAGGTTGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCCCTGCCTGCTCCTGGCCAAGCACTCTCAACCCCTCAGTGACCCACGGCTGATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACGTGAGAAGCAGCTTCCCTTCCTGGAAGGAGCTGAGCATGCCAGGCTTCATCCAGAAGCAGCAGGCCAGAGTCTATGTCCAGTTCTTTCTGGCTGATGCCCTGATCCTGCCTGTGCCCAGACCCTGCCTTCATTCAGCAACACCCTCAACACCTCAGACAGATCCCACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCGGCTCTTCTTGCTCTGCCACAAGGAGGCCCTCATGAAGCGTAATTTTTGTGTCCCCCCAGGAGCAAGTCCAGAGGTGCCCAAGCCCGCCCTCAGTTTCTATGTGTTGGGGAGCTGGCTTGGGGGCACCCAGAGGAAGGAGGGTACTGGATGGGGGCTGCCCGAGCCCCAGGGAAATGACGACAATGATCAGAAGGTTCACCTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCGCTACACCAATGTTGTTTGAAAAGGATGGTTCATCCTGCATATCTCGGCGTCCTCTGGAGTTGGCTGGCTGTGCATCCTGCCTCACTGTCCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGCTGGATGCAAACAAGTCATTGCCTGAATCCTCACTGACCGACCTGCTCAGTGACAATTTCACAGATTCCTTGGTGTCTTTCTCCGCTGAGATTTTGTCACGGACACTATGTGAACCCCTTGTGGCGTCTCTCTGGATGAAACTGGGGAACACGGGGGCCATGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAATGTGAATTCCCCCCTCACCTGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGATCTCACAATGTTTATTGTTGTTTCCGGTCATCCACTTATGTGCAGGTCCTGAGTTTTCCCCCTGAGACCACCATCAGCATTCCCCTGCCCCACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCCACTGCCTCTTGCCATATCGTCTCTGTCTTCAGCCTTCAGCTCTTCTGGTCTTCAGCCAGGGTTGACGAGCCCATGACCATGTTCCTCTGGACACTTTGTACTAGCCCCTCTGTCCTCCGTCCTATTGTGCTTTCTTTTGAGCTGGAAAGGAAACCGTCGAAGATCGTCCCATTAGAACCTCCTCGGCTACAGCGATTCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTCCTGTTAA
Amino sequence
MAAGRAQVPSSEQAWLEDAQVFIQKTLCPAVKEPNVQLTPLVIDCVKTVWLSQGRNQGSTLPLSYSFVSVQDLKTHQRLPCCSHLSWSSSAYQAWAQEAGPNGNPLPREQLLLLGTLTDLSADLEQECRNGSLYVRDNTGVLSCELIDLDLSWLGHLFLFPRWSYLPPARWNSSGEGHLELWDAPVPVFPLTISPGPVTPIPVLYPESASCLLRLRNKLRGVQRNLAGSLVRLSALVKSKQKAYFILSLGRSHPAVTHVSIIVQVPAQLVWHRALRPGTAYVLTELRVSKIRGQRQHVWMTSQSSRLLLLKPECVQELELELEGPLLEADPKPLPMPSNSEDKKDPESLVRYSRLLSYSGAVTGVLNEPAGLYELDGQLGLCLAYQQFRGLRRVMRPGVCLQLQDVHLLQSVGGGTRRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSPSLGLQLLAPTLDLLAPPGSPVRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPSAFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFPSWKELSMPGFIQKQQARVYVQFFLADALILPVPRPCLHSATPSTPQTDPTGPEGPHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPEPQGNDDNDQKVHLIFFGSSVRWFEFLHPGQVYRLIAPGPATPMLFEKDGSSCISRRPLELAGCASCLTVQDNWTLELESSQDIQDVLDANKSLPESSLTDLLSDNFTDSLVSFSAEILSRTLCEPLVASLWMKLGNTGAMRRCVKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPETTISIPLPHIYLAELLQGGQSPFQATASCHIVSVFSLQLFWSSARVDEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESEYSSSLGILASSC*