ENST00000368602.4 TRAPPC3L
Information
- Transcript ID
- ENST00000368602.4
- Genome
- hg38
- Position
- chr6:116,494,989-116,545,684
- Strand
- -
- CDS length
- 546
- Amino acid length
- 182
- Gene symbol
- TRAPPC3L
- Gene type
- protein-coding
- Gene description
- trafficking protein particle complex subunit 3L
- Gene Entrez Gene ID
- 100128327
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 116,494,989 | 116,497,073 |
| 4 | 116,500,481 | 116,500,666 |
| 3 | 116,540,363 | 116,540,462 |
| 2 | 116,543,303 | 116,543,400 |
| 1 | 116,545,473 | 116,545,684 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 116,496,954 | 116,497,073 |
| 4 | CDS | 116,500,481 | 116,500,666 |
| 3 | CDS | 116,540,363 | 116,540,462 |
| 2 | CDS | 116,543,303 | 116,543,400 |
| 1 | CDS | 116,545,473 | 116,545,514 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr6 | 116,816,152 | 116,866,847 | Link |
CDS sequence
ATGTCTCGCCCTGCACACCGAAGACCAGAATACCATAAAATAAATAAAGATCTCTTTGTCCTTACCTATGGAGCTCTGGTTGCCCAGCTGTGTAAGGATTATGAGAAGGATGAAGATGTGAACCAATATTTAGATAAAATGGGTTACGGCATTGGAACGCGGCTTGTGGAAGACTTTTTGGCTCGATCCTGCGTGGGAAGATGCCATAGTTATTCAGAAATTATAGACATAATTGCCCAGGTTGCTTTCAAGATGTACCTGGGAATTACACCAAGTGTGACCTGTAACAATTCAAGCAAAAATGAATTTTCCCTGATTCTAGAGAAGAATCCCCTGGTGGAGTTTGTGGAAGAGCTCCCTGCTGGGCGATCTTCTCTGTGCTACTGCAACTTGCTCTGTGGGATTATCAGAGGTGCCTTGGAAATGGTTCATTTGGCGGCTGATGTTACATTCTTGCAAGACAGACTAAAAGGTGACAGTGTGACAGAAATAGGAATAACATTTCTAAAAAAGCGAGACGAGAAAAAATATAGAGGGAAAAAATGA
Amino sequence
MSRPAHRRPEYHKINKDLFVLTYGALVAQLCKDYEKDEDVNQYLDKMGYGIGTRLVEDFLARSCVGRCHSYSEIIDIIAQVAFKMYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLLCGIIRGALEMVHLAADVTFLQDRLKGDSVTEIGITFLKKRDEKKYRGKK*