ENST00000316375.3 C11orf42
Information
- Transcript ID
- ENST00000316375.3
- Genome
- hg38
- Position
- chr11:6,205,557-6,211,135
- Strand
- +
- CDS length
- 1,002
- Amino acid length
- 334
- Gene symbol
- C11orf42
- Gene type
- protein-coding
- Gene description
- chromosome 11 open reading frame 42
- Gene Entrez Gene ID
- 160298
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 6,205,557 | 6,205,687 |
| 2 | 6,209,850 | 6,210,648 |
| 3 | 6,210,912 | 6,211,135 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 6,205,616 | 6,205,687 |
| 2 | CDS | 6,209,850 | 6,210,648 |
| 3 | CDS | 6,210,912 | 6,211,042 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 6,226,787 | 6,232,365 | Link |
CDS sequence
ATGTTGGTGGGTACCCCCAACCTGCTGACACTGGATGAAGCTGATGCCACCTGGACCCTCATCAAGGATAAGGTCATCGAGGAGCACTTTGGGCCCAATGCAGTAGCAGTACCTTTCCTGTCAGATGCAGCCTGCTATGACCTACTGGGTGTGCTGGTAAAACAGTCCCGCCCAGCCCATACCCGCCTGGCTTTGCCAGGTCGGCAGGGCCGGAGGGCACTGAAACCAGTGGGGCCACTACCAAGCCTCCTGGAGCAGGCAGGATCTGAGGGTGCCTTCGCCCACTGCACTCGGGAATACTCACCAAATGGCCGAGCAGAGAGAGCCTATGAAGAGACGCGAATGTTGGATGGACAGCCCTGCAAGATCCGCCTACATATGGGTGACCTGCGCAAGAAGGTTGCCTTCCTGTTGCTGCCACCAGGGCAGGTGAGCCTACAGCAGACTCTTCCCTGGCTCCGAAGCACCCACAGCATCTATGTCATCTACCAGGTCTTCTCTTGTTCCTGGCTGCAGCTGGGGCTGACGTCTACAGCCCGTGAGCCCCAGCTCCTCCGGCTACTTCGGTCATTACCTGTTGCCTTCTCCTGCCTCAAGTTTTCACTGCAGTCTAAGGGCGTGCTGGGACCACAGAAGCCTCTCACTAAAGACCCATTGCCCCATGGGGCCAACTGGGTCAGACCCAACCTCAGCATCATGCCGCCTCTGGCCCCCACATCAGCACCTGCTGATACAACTGAAGCTGCTGATGTGCCCCCACCTGTCCCAGCCCCACCTACGCCACCTCCCCAGGAAGGGCCAGAGGACAAACCCACCAGATTCTCCTACAAGGGCCGAAACCCCTTCTGGAGGGGGCCCCAGATACTGTCAGAGAACTGGCTCTTCAGCCCCCGCAGCCCTCCACCAGGAGCCCAGGGTGGGGGCCCCAGGGACCCCGACGGGCACTCCATGTCCCTGCCCCTGCTGCAGGGTCTATCCTCAGAGTTCGACAGTGACGACTGA
Amino sequence
MLVGTPNLLTLDEADATWTLIKDKVIEEHFGPNAVAVPFLSDAACYDLLGVLVKQSRPAHTRLALPGRQGRRALKPVGPLPSLLEQAGSEGAFAHCTREYSPNGRAERAYEETRMLDGQPCKIRLHMGDLRKKVAFLLLPPGQVSLQQTLPWLRSTHSIYVIYQVFSCSWLQLGLTSTAREPQLLRLLRSLPVAFSCLKFSLQSKGVLGPQKPLTKDPLPHGANWVRPNLSIMPPLAPTSAPADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDGHSMSLPLLQGLSSEFDSDD*