ENST00000300605.11 HDHD2
Information
- Transcript ID
- ENST00000300605.11
- Genome
- hg38
- Position
- chr18:47,107,410-47,150,500
- Strand
- -
- CDS length
- 780
- Amino acid length
- 260
- Gene symbol
- HDHD2
- Gene type
- protein-coding
- Gene description
- haloacid dehalogenase like hydrolase domain containing 2
- Gene Entrez Gene ID
- 84064
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 47,107,410 | 47,108,785 |
| 6 | 47,112,977 | 47,113,040 |
| 5 | 47,115,132 | 47,115,348 |
| 4 | 47,130,244 | 47,130,328 |
| 3 | 47,134,496 | 47,134,704 |
| 2 | 47,136,339 | 47,136,449 |
| 1 | 47,150,378 | 47,150,500 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 47,108,682 | 47,108,785 |
| 6 | CDS | 47,112,977 | 47,113,040 |
| 5 | CDS | 47,115,132 | 47,115,348 |
| 4 | CDS | 47,130,244 | 47,130,328 |
| 3 | CDS | 47,134,496 | 47,134,704 |
| 2 | CDS | 47,136,339 | 47,136,439 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr18 | 44,633,781 | 44,676,871 | Link |
CDS sequence
ATGGCAGCATGCCGTGCATTAAAAGCTGTTTTGGTAGATCTCAGTGGCACACTTCACATTGAAGATGCAGCTGTGCCAGGCGCACAGGAAGCTCTTAAAAGGTTACGTGGTGCTTCTGTAATCATTAGGTTTGTGACCAATACAACCAAAGAGAGCAAGCAAGACCTGTTAGAAAGGTTGAGAAAATTGGAATTTGATATCTCTGAAGATGAAATATTCACATCTCTGACTGCAGCCAGAAGTTTACTAGAGCGGAAACAAGTCAGACCCATGCTGCTAGTTGATGATCGGGCACTACCTGATTTCAAAGGAATACAAACAAGTGATCCTAATGCTGTGGTCATGGGATTGGCACCAGAACATTTTCATTATCAAATTCTGAATCAAGCATTCCGGTTACTCCTGGATGGAGCACCTCTGATAGCAATCCACAAAGCCAGGTATTACAAGAGGAAAGATGGCTTAGCCCTGGGGCCTGGACCATTTGTGACTGCTTTAGAGTATGCCACAGATACCAAAGCCACAGTCGTGGGGAAACCAGAGAAGACGTTCTTTTTGGAAGCATTGCGGGGCACTGGCTGTGAACCTGAGGAGGCTGTCATGATAGGAGATGATTGCAGGGATGATGTTGGTGGGGCTCAAGATGTCGGCATGCTGGGCATCTTAGTAAAGACTGGGAAATATCGAGCATCAGATGAAGAAAAAATTAATCCACCTCCTTACTTAACTTGTGAGAGTTTCCCTCATGCTGTGGACCACATTCTGCAGCACCTATTGTGA
Amino sequence
MAACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLRKLEFDISEDEIFTSLTAARSLLERKQVRPMLLVDDRALPDFKGIQTSDPNAVVMGLAPEHFHYQILNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKATVVGKPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKTGKYRASDEEKINPPPYLTCESFPHAVDHILQHLL*