ENST00000335565.6 SLITRK2
Information
- Transcript ID
- ENST00000335565.6
- Genome
- hg19
- Position
- chrX:144,899,347-144,911,374
- Strand
- +
- CDS length
- 2,538
- Amino acid length
- 846
- Gene symbol
- SLITRK2
- Gene type
- protein-coding
- Gene description
- SLIT and NTRK like family member 2
- Gene Entrez Gene ID
- 84631
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 144,899,347 | 144,899,544 |
| 2 | 144,901,992 | 144,902,054 |
| 3 | 144,902,866 | 144,903,402 |
| 4 | 144,903,523 | 144,903,671 |
| 5 | 144,903,901 | 144,911,374 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 144,903,944 | 144,906,481 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chrX | 145,817,829 | 145,829,856 | Link |
CDS sequence
ATGCTGAGCGGCGTTTGGTTCCTCAGTGTGTTAACCGTGGCCGGGATCTTACAGACAGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGATCCGCTGTCTGTGCGAAGAAAAGGAAAACGTACTGAATATCAACTGTGAGAACAAAGGATTTACAACAGTTAGCCTGCTCCAGCCCCCCCAGTATCGAATCTATCAGCTTTTTCTCAATGGAAACCTCTTGACAAGACTGTATCCAAACGAATTTGTCAATTACTCCAACGCGGTGACTCTTCACCTAGGTAACAACGGGTTACAGGAGATCCGAACGGGGGCATTCAGTGGCCTGAAAACTCTCAAAAGACTGCATCTCAACAACAACAAGCTTGAGATATTGAGGGAGGACACCTTCCTAGGCCTGGAGAGCCTGGAGTATCTCCAGGCCGACTACAATTACATCAGTGCCATCGAGGCTGGGGCATTCAGCAAACTTAACAAGCTCAAAGTGCTCATCCTGAATGACAACCTTCTGCTTTCACTGCCCAGCAATGTGTTCCGCTTTGTCCTGCTGACCCACTTAGACCTCAGGGGGAATAGGCTAAAAGTAATGCCTTTTGCTGGCGTCCTTGAACATATTGGAGGGATCATGGAGATTCAGCTGGAGGAAAATCCATGGAATTGCACTTGTGACTTACTTCCTCTCAAGGCCTGGCTAGACACCATAACTGTTTTTGTGGGAGAGATTGTCTGTGAGACTCCCTTTAGGTTGCATGGGAAAGACGTGACCCAGCTGACCAGGCAAGACCTCTGTCCCAGAAAAAGTGCCAGTGATTCCAGTCAGAGGGGCAGCCATGCTGACACCCACGTCCAAAGGCTGTCACCTACAATGAATCCTGCTCTCAACCCAACCAGGGCTCCGAAAGCCAGCCGGCCGCCCAAAATGAGAAATCGTCCAACTCCTCGAGTGACTGTGTCAAAGGACAGGCAAAGTTTTGGACCCATCATGGTGTACCAGACCAAGTCTCCTGTGCCTCTCACCTGTCCCAGCAGCTGTGTCTGCACCTCTCAGAGCTCAGACAATGGTCTGAATGTAAACTGCCAAGAAAGGAAGTTCACTAATATCTCTGACCTGCAGCCCAAACCGACCAGTCCAAAGAAACTCTACCTAACAGGGAACTATCTTCAAACTGTCTATAAGAATGACCTCTTAGAATACAGTTCTTTGGACTTACTGCACTTAGGAAACAACAGGATTGCAGTCATTCAGGAAGGTGCCTTTACAAACCTGACCAGTTTACGCAGACTTTATCTGAATGGCAATTACCTTGAAGTGCTGTACCCTTCTATGTTTGATGGACTGCAGAGCTTGCAATATCTCTATTTAGAGTATAATGTCATTAAGGAAATTAAGCCTCTGACCTTTGATGCTTTGATTAACCTACAGCTACTGTTTCTGAACAACAACCTTCTTCGGTCCTTACCTGATAATATATTTGGGGGGACGGCCCTAACCAGGCTGAATCTGAGAAACAACCATTTTTCTCACCTGCCCGTGAAAGGGGTTCTGGATCAGCTCCCGGCTTTCATCCAGATAGATCTGCAGGAGAACCCCTGGGACTGTACCTGTGACATCATGGGGCTGAAAGACTGGACAGAACATGCCAATTCCCCTGTCATCATTAATGAGGTGACTTGCGAATCTCCTGCTAAGCATGCAGGGGAGATACTAAAATTTCTGGGGAGGGAGGCTATCTGTCCAGACAGCCCAAACTTGTCAGATGGAACCGTCTTGTCAATGAATCACAATACAGACACACCTCGGTCGCTTAGTGTGTCTCCTAGTTCCTATCCTGAACTACACACTGAAGTTCCACTGTCTGTCTTAATTCTGGGATTGCTTGTTGTTTTCATCTTATCTGTCTGTTTTGGGGCTGGTTTATTCGTCTTTGTCTTGAAACGCCGAAAGGGAGTGCCGAGCGTTCCCAGGAATACCAACAACTTAGACGTAAGCTCCTTTCAATTACAGTATGGGTCTTACAACACTGAGACTCACGATAAAACAGACGGCCATGTCTACAACTATATCCCCCCACCTGTGGGTCAGATGTGCCAAAACCCCATCTACATGCAGAAGGAAGGAGACCCAGTAGCCTATTACCGAAACCTGCAAGAGTTCAGCTATAGCAACCTGGAGGAGAAAAAAGAAGAGCCAGCCACACCTGCTTACACAATAAGTGCCACTGAGCTGCTAGAAAAGCAGGCCACACCAAGAGAGCCTGAGCTGCTGTATCAAAATATTGCTGAGCGAGTCAAGGAACTTCCCAGCGCAGGCCTAGTCCACTATAACTTTTGTACCTTACCTAAAAGGCAGTTTGCCCCTTCCTATGAATCTCGACGCCAAAACCAAGACAGAATCAATAAAACCGTTTTATATGGAACTCCCAGGAAATGCTTTGTGGGGCAGTCAAAACCCAACCACCCTTTACTGCAAGCTAAGCCGCAATCAGAACCGGACTACCTCGAAGTTCTGGAAAAACAAACTGCAATCAGTCAGCTGTGA
Amino sequence
MLSGVWFLSVLTVAGILQTESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQLTRQDLCPRKSASDSSQRGSHADTHVQRLSPTMNPALNPTRAPKASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPAKHAGEILKFLGREAICPDSPNLSDGTVLSMNHNTDTPRSLSVSPSSYPELHTEVPLSVLILGLLVVFILSVCFGAGLFVFVLKRRKGVPSVPRNTNNLDVSSFQLQYGSYNTETHDKTDGHVYNYIPPPVGQMCQNPIYMQKEGDPVAYYRNLQEFSYSNLEEKKEEPATPAYTISATELLEKQATPREPELLYQNIAERVKELPSAGLVHYNFCTLPKRQFAPSYESRRQNQDRINKTVLYGTPRKCFVGQSKPNHPLLQAKPQSEPDYLEVLEKQTAISQL*