ENST00000343004.10 PABIR2
Information
- Transcript ID
- ENST00000343004.10
- Genome
- hg19
- Position
- chrX:133,903,596-133,931,235
- Strand
- -
- CDS length
- 804
- Amino acid length
- 268
- Gene symbol
- PABIR2
- Gene type
- protein-coding
- Gene description
- PABIR family member 2
- Gene Entrez Gene ID
- 159090
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 10 | 133,903,596 | 133,906,313 |
| 9 | 133,915,851 | 133,915,947 |
| 8 | 133,919,916 | 133,919,980 |
| 7 | 133,921,502 | 133,921,563 |
| 6 | 133,922,760 | 133,922,861 |
| 5 | 133,923,115 | 133,923,169 |
| 4 | 133,923,253 | 133,923,296 |
| 3 | 133,923,610 | 133,923,666 |
| 2 | 133,927,845 | 133,927,923 |
| 1 | 133,930,138 | 133,931,235 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 10 | CDS | 133,906,169 | 133,906,313 |
| 9 | CDS | 133,915,851 | 133,915,947 |
| 8 | CDS | 133,919,916 | 133,919,980 |
| 7 | CDS | 133,921,502 | 133,921,563 |
| 6 | CDS | 133,922,760 | 133,922,861 |
| 5 | CDS | 133,923,115 | 133,923,169 |
| 4 | CDS | 133,923,253 | 133,923,296 |
| 3 | CDS | 133,923,610 | 133,923,666 |
| 2 | CDS | 133,927,845 | 133,927,923 |
| 1 | CDS | 133,930,138 | 133,930,235 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chrX | 134,769,566 | 134,797,205 | Link |
CDS sequence
ATGGCTCAGGAGAAAATGGAGCTGGACCTTGAGCCTGACACATCTTATGGGGGAACCCTGAGGAGATCCAGCAGCGCTCCCCTAATCCATGGGCTCAGTGACCTTTCACAGGTTTTCCAACCTTACACACTTAGAACTCGGAGGAATAGTACAACAATTATGAGCCGTCACAGCCTGTTGCTGTCATCCTCACCTAATCGTATTCCTAGTAGCAGACTGCATCAGATCAAAAGGGAAGAAGGCCTGGATATGGTGAACAGAGAAACTGCACATGAAAGGGAAATGCAAACGGCAATGCAGATAAGCCAATCATGGGATGAGAGCTTGAGCCTGAGTGACAGTGATTTTGACAAGCCGGAGAAATTATATTCTCCTAAGAGAATTGACTTCACTCCAGTTTCTCCAGCACCTTCACCCACCAGGGGATTCGGAAAGATGTTCGTGAGCAGCAGTGGATTGCCACCAAGTCCAGTTCCCAGTCCAAGACGATTTTCAAGCAGGAGAAGTCAGAGTCCAGTCAAGTGCATTAGACCCAGTGTTCTTGGTCCTCTTAAAAGAAAAGGTGAAATGGAGACAGAAAGTCAGCCCAAGAGACTCTTCCAAGGCACTACCAATATGTTATCTCCAGATGCCGCGCAACTGTCTGATCTCAGTTCATGTTCAGATATTTTGGATGGCAGTAGTAGCAGCAGTGGCTTATCCTCAGACCCGCTGGCTAAAGGCAGCGCTACCGCAGAGTCTCCAGTAGCATGCTCCAATTCATGCTCTTCGTTCATCTTGATGGATGATCTCTCACCCAAGTGA
Amino sequence
MAQEKMELDLEPDTSYGGTLRRSSSAPLIHGLSDLSQVFQPYTLRTRRNSTTIMSRHSLLLSSSPNRIPSSRLHQIKREEGLDMVNRETAHEREMQTAMQISQSWDESLSLSDSDFDKPEKLYSPKRIDFTPVSPAPSPTRGFGKMFVSSSGLPPSPVPSPRRFSSRRSQSPVKCIRPSVLGPLKRKGEMETESQPKRLFQGTTNMLSPDAAQLSDLSSCSDILDGSSSSSGLSSDPLAKGSATAESPVACSNSCSSFILMDDLSPK*