ENST00000465301.2 RTL9

Information
Transcript ID
ENST00000465301.2
Genome
hg19
Position
chrX:109,662,285-109,699,562
Strand
+
CDS length
4,167
Amino acid length
1,389
Gene symbol
RTL9
Gene type
protein-coding
Gene description
retrotransposon Gag like 9
Gene Entrez Gene ID
57529
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 109,662,285 109,662,363
2 109,688,381 109,688,496
3 109,693,795 109,697,892
4 109,698,430 109,699,562
CDS
Exon number Type Start Stop
3 CDS 109,693,846 109,697,892
4 CDS 109,698,430 109,698,549
Other genome
Genome Chromosome Start End Links
hg38 chrX 110,419,057 110,456,334 Link
CDS sequence
ATGTCAATACCCTTACATTCACTGCGATTCAACAATACAATGAGGGAGGAAAATGTTGAGCCCCAAAACAAGCAGATGGCCTTCTGTAGACCAATGACAGAGACCAGAGCAGACGTACAGATTCTGCATTCTCATGTACAGTTGCCTATAGTCTCAACTTCAGCCTCAGACCCTGGAGGGACATCCACACAGTTGATGACATCTCCAGTCTTTGACACCATGTCTGCACCTCTAATGGGAGTACCAAACTCTGGAGCATTGTCCCCACCCCTAATGCCAGCCTCAGACTCTGGGGCACTTTCCCCATTGCTAATGCCAGCCTCAGACTCTGGGGCACTGTCCCCATTGCTAATGCCAGCCTTAGATTCTGGAACATTGTCCCCATTGCTGTCCACTTCAGAGTATGGGGTAATGTCCCCAGGGATGATGACAATTCCTGATTTTGGAACGATGTCCGCAACGCTAATGGTAGCACCAGATTCTGCAGAGATATCACCATTGGCAATGCCAGCTCCATCCTCTGGAGTGGTGTGTACACCTATAATGAGCACTTCATCCTCTGAGGCAATGTCCACACCATTAATGCTAGCCCCAGATTCTGGAGAGTTATCCCCAATTCTAATGCAAGATATGAATCCTGGAGTGATGTCTACACAGCCAGTGCCAGCTCCCAGCTCTGAGGCAATGTCCCCATTGCAAATTACAGATGAAGACACCGAAGCAATGTCCAAAGTGCTAATGACTGCTCTAGCCTCTGGAGAGATATCTTCGCTGCTAATGTCAGGCACGGACTCTGAAGCAATATCCTCACTGATAATGTCAGCTGTAGCTTCTGGAGGTACATCACCCCAGCCAACAAGCACCCAAAACTCTGGGGGAATACCTACCCCGCTCATGTCAGATCTAGACTCTGGAATAATGTCATCGCTTTTAATGTCATCTCCAGGCTCTGAAGTAATGTCCACACCGCTACTGTCAGTCCCAGATGCTGGAGAAATGTCCACATTACCAAAGCCAGCTCCAGATGCTGAAGCAATGTCCCCAGCACTAATGACGGCCCTACCCTCTGGAGTGATGCCCACCCAAACGATGCCAGCCCCAGGCTCTGGGGCGATGTCCCCATGGTCAACACAAAATGTAGACTCTGAAATGATGTCTAATCCGCCAGTGAGAGCAACAGCCTCTGGGGTGATGTCTGCACCACCAGTAAGAGCTTTAGATTCTGGAGCAATGTCCACACCGCTAATGGGAGCCCCAGCCTCTGGAAATATGTCTACATTGCAAAAGACAGTTCCAGCCTCTGGAGCCATGACCACCTCACTGATGACAGTCCCAAGCTCTGGAGTGATGTCCACAGAGCAAATGTCAGCCACAGCCTCTAGAGTAATGTCCGCACAGTTAACAATGGCCAAAACTTCTGGAGCAATGCCCACAGGCTCTATGAAAGCCGTGGCAAAACAATACAAGAGAGCCACAGCCTCTGGAAAGATGTCCACGCCACTGAGGAGAGCTCCAACTTCTGGAGCAATGTCCACCCAACCAGTTACGGCAACAGCCTCTGAAACAATGTCCATGCCACAATTGACAGTCCCAGCCTCTGGATCAATGTCCATGCTGCAAATGAGAGCCCCTGTCTCTGAAGCAATGTCCATGCCACAAATGAGAACCATGGCCTCAGGATTGACATCTGCAGCACAGATGAAAGCCATGACTTCTGGAGCAATGTCCACCCCACTAATGACAGCCCAAACCTCTGGATCAACATCCACGCTGTTAATGAGAGACACAGCCTCAGGAGTGATGTCCTGTCCACAAATGAGATCTCTGGCCTCTGGAGCATTGTCCAAGCCACTAATGACACCCAAAGCCTCAGGAACGATGTTCACGGAGAAAATGACAACCACAGCTTCTGAAGCAATGCCCACACTGCTAATGAGAGACACAGTTTCTGGAGCTCTGTCCATGCCGCAAATGACAGACACAGCCTCTGGAGGGTTGTCTGCATCGCTAATGAGAGACACAGCTTCTGGAGCAATGTCCACATCACAAATGACAGCCACAGTCTCTGGAGGGATGTCCATGCCACTAATGAGAGCTCAAGACCCAGGAGTAATGCCTGCCTCACTAATGAGAGCCAAAGTGTCTGGAAAGATGCTCAGTCAGCCAATGAGCACCCAAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGTCCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCTCTGATGTGATGTCCACACCAACAGTGAGAGCCTGGACCTCTGAAACAATGTCCACACCACTAATGAGAACCTCAGACCCTGGAGAGAGGCCCTCACTGCTCACAAGAGCTTCATCCTCTGGAGAGATGTCCCTACCACTAATGAGAGCTCCAGCTTCTGGAGAGATAGCCACGCCTCTGAGATCCCCAGCTTATGGAGCCATGTCTGCTCCACAAATGACAGCCACAGCCTCTGGAATGATGTCATCCATGCCACAAGTGAAGGCTCCCATCTCTGGAGCAATGTCCATGCCACTAACAAGATCCACAGCCTCTGGAGGGATGTCCATGCCACTGATGAGAGCCCCAGACTCTAGAGTGACATCCACATCACAAATGATGCCCACAGCTTCTGGAGACATGTGCACACTACCAGTGCGAGCCCCAGCCTCTGGAGGGGTGTCCTCACCACTAGTAAGAGCTCCAGCCTCTGGAACTATGTCCACACCACTAAGGAGACCCTCAGCCTGTGAGACTGTGTCCACAGAGTTAATGAGAGCTTCAGCCTCTGGACATATGTCCACTGCACAAACAACAGCCATGGTCTCTGGAGGGATGTCCAAGCCATTAATGAGAGCCCCGGCCTCTGGAACAATGCCCATGCCTTTAATGTCAGCCATGGCTTCTGGAGAGATGTCTATGCCGCTAATGGAAACCATGGCCTCTGGAGCAACGTCCACATTGCAAACCAGTGTTGCGAACTCTAGATCTATGTCCTTGTCACAAACAACATATACCGTGTCTGGAAGGATGGCCACAGCGCCAATTAGAGCCTCTGCTTCTGGAGCAAGGTCCACATCATTTATGAGAGCCTCAGTTTCTGGATCGATGCCCATGCCACTACCAAGAGCCACAGCCTCTGGATGTGGCATGGGTATGTCCATGCCACAAATGACAGCCACAGACTCTAGAGGGATGTCCACACCACTAATGAGGGCCTCAGGCCCTGGAACAATGTCCACACCACAGACAGCCTTTGGAGTGATGTCCACTCCGGAAATCAAAGCCACAGACTCTGGAGAGGCATCCACCTCTCACATTAACATCACAGCCTCTGGATCAAAGCCCACATCGCACATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCAGCACTCTGCTACCTCTTAGAAGAGCAGGAAGCAGCCCGGGGCTCATGCTCTGTGGAGGAAGAGATGGAGATTGATGAGGAGAAGCAAATGAAGGGGTTTTTGGACGATTCAGAGAGAATGGCATTTCTGGTATCTCTTCATCTGGGAGCAGCAGAGAGGTGGTTCATCTTGCAAATGGAGGTAGGAGAACCTCTCTCACATGAAAATAAATCTTTCCTGAGAAGATCCCAGGGCATATATGACTCCCTATCTGAGATAGACATCCTCAGTGCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCTGCTGGCCCGACATTTGTCTTGGTCTGATGCCATTCTACGGACCAGGTTTCTGGAAGGACTCTCAGAAGCTGTTACCACCAAAATGGGTCGGATCTTCCTGAAGGTGGCTGGCAGCCTAAAGGAGCTGATAGACAGGTCTCTGTACACCGAGTGCCAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAATAATGAGGAGGCCATGGGGAATGAACTGAGCTCTCAGCAGCAGACTGAGGAGCACCAGCATGTTTCCAAACGCTGTTACTACCTGAAAGAGCATGGAGACCCCCAAGAAGGTCTTCATGATCACCTTGGACAGAGCACAGGCCATCATCAGAAGGCCCATACCAACAAGTAA
Amino sequence
MSIPLHSLRFNNTMREENVEPQNKQMAFCRPMTETRADVQILHSHVQLPIVSTSASDPGGTSTQLMTSPVFDTMSAPLMGVPNSGALSPPLMPASDSGALSPLLMPASDSGALSPLLMPALDSGTLSPLLSTSEYGVMSPGMMTIPDFGTMSATLMVAPDSAEISPLAMPAPSSGVVCTPIMSTSSSEAMSTPLMLAPDSGELSPILMQDMNPGVMSTQPVPAPSSEAMSPLQITDEDTEAMSKVLMTALASGEISSLLMSGTDSEAISSLIMSAVASGGTSPQPTSTQNSGGIPTPLMSDLDSGIMSSLLMSSPGSEVMSTPLLSVPDAGEMSTLPKPAPDAEAMSPALMTALPSGVMPTQTMPAPGSGAMSPWSTQNVDSEMMSNPPVRATASGVMSAPPVRALDSGAMSTPLMGAPASGNMSTLQKTVPASGAMTTSLMTVPSSGVMSTEQMSATASRVMSAQLTMAKTSGAMPTGSMKAVAKQYKRATASGKMSTPLRRAPTSGAMSTQPVTATASETMSMPQLTVPASGSMSMLQMRAPVSEAMSMPQMRTMASGLTSAAQMKAMTSGAMSTPLMTAQTSGSTSTLLMRDTASGVMSCPQMRSLASGALSKPLMTPKASGTMFTEKMTTTASEAMPTLLMRDTVSGALSMPQMTDTASGGLSASLMRDTASGAMSTSQMTATVSGGMSMPLMRAQDPGVMPASLMRAKVSGKMLSQPMSTQDPGGMSMSPMKSMTAGGMQMNSPTSDVMSTPTVRAWTSETMSTPLMRTSDPGERPSLLTRASSSGEMSLPLMRAPASGEIATPLRSPAYGAMSAPQMTATASGMMSSMPQVKAPISGAMSMPLTRSTASGGMSMPLMRAPDSRVTSTSQMMPTASGDMCTLPVRAPASGGVSSPLVRAPASGTMSTPLRRPSACETVSTELMRASASGHMSTAQTTAMVSGGMSKPLMRAPASGTMPMPLMSAMASGEMSMPLMETMASGATSTLQTSVANSRSMSLSQTTYTVSGRMATAPIRASASGARSTSFMRASVSGSMPMPLPRATASGCGMGMSMPQMTATDSRGMSTPLMRASGPGTMSTPQTAFGVMSTPEIKATDSGEASTSHINITASGSKPTSHMTATTPETAKPPPKEVPSFGMLTPALCYLLEEQEAARGSCSVEEEMEIDEEKQMKGFLDDSERMAFLVSLHLGAAERWFILQMEVGEPLSHENKSFLRRSQGIYDSLSEIDILSAVLCHPKQGQKSVRQYATDFLLLARHLSWSDAILRTRFLEGLSEAVTTKMGRIFLKVAGSLKELIDRSLYTECQLAEEKDSPGNSSQVLPTACKRNNEEAMGNELSSQQQTEEHQHVSKRCYYLKEHGDPQEGLHDHLGQSTGHHQKAHTNK*