ENST00000374454.1 PDZD11
Information
- Transcript ID
- ENST00000374454.1
- Genome
- hg19
- Position
- chrX:69,506,742-69,509,795
- Strand
- -
- CDS length
- 423
- Amino acid length
- 141
- Gene symbol
- PDZD11
- Gene type
- protein-coding
- Gene description
- PDZ domain containing 11
- Gene Entrez Gene ID
- 51248
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 69,506,742 | 69,506,966 |
| 7 | 69,507,126 | 69,507,186 |
| 6 | 69,507,582 | 69,507,680 |
| 5 | 69,507,967 | 69,508,023 |
| 4 | 69,508,280 | 69,508,363 |
| 3 | 69,509,105 | 69,509,204 |
| 2 | 69,509,372 | 69,509,443 |
| 1 | 69,509,710 | 69,509,795 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 69,506,932 | 69,506,966 |
| 7 | CDS | 69,507,126 | 69,507,186 |
| 6 | CDS | 69,507,582 | 69,507,680 |
| 5 | CDS | 69,507,967 | 69,508,023 |
| 4 | CDS | 69,508,280 | 69,508,363 |
| 3 | CDS | 69,509,105 | 69,509,191 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chrX | 70,286,892 | 70,289,945 | Link |
CDS sequence
ATGGACAGCCGGATTCCTTATGATGACTACCCGGTGGTTTTCTTGCCTGCCTATGAGAATCCTCCAGCATGGATTCCTCCTCATGAGAGGGTACACCACCCGGACTACAACAATGAGTTGACCCAGTTTCTGCCCCGAACCATCACACTGAAGAAGCCTCCTGGAGCTCAGTTGGGATTTAACATCCGAGGAGGAAAGGCCTCCCAGCTAGGCATCTTCATCTCCAAGGTGATTCCTGACTCTGATGCACATAGAGCAGGACTGCAGGAAGGGGACCAAGTTCTAGCTGTGAATGATGTGGATTTCCAAGATATTGAGCACAGCAAGGCTGTTGAGATCCTGAAGACAGCTCGTGAAATCAGCATGCGTGTGCGCTTCTTTCCCTACAATTATCATCGCCAAAAAGAGAGGACTGTGCACTAG
Amino sequence
MDSRIPYDDYPVVFLPAYENPPAWIPPHERVHHPDYNNELTQFLPRTITLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKTAREISMRVRFFPYNYHRQKERTVH*