ENST00000489298.1 VCF2

Information
Transcript ID
ENST00000489298.1
Genome
hg19
Position
chrX:55,172,371-55,187,535
Strand
-
CDS length
345
Amino acid length
115
Gene symbol
VCF2
Gene type
protein-coding
Gene description
VCP nuclear cofactor family member 2
Gene Entrez Gene ID
90736
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 55,172,371 55,172,744
2 55,185,562 55,185,661
1 55,187,298 55,187,535
CDS
Exon number Type Start Stop
3 CDS 55,172,517 55,172,744
2 CDS 55,185,562 55,185,661
1 CDS 55,187,298 55,187,314
Other genome
Genome Chromosome Start End Links
hg38 chrX 55,145,938 55,161,102 Link
CDS sequence
ATGCTGGTTCTTTGGTTGAAAAGAAGAAGAAATGGCAGTAAAGAGGGCAACCATCATTCCACCCAGCCCAAAAGGAATAAGAGAAACCCTATCTTTCAGGATTCTCAAGATACAGAGTTTTCATGGAGTGATAATGAAAGGAGCAGCAGCCGCATTAATATCCCAGAGAGAGCAAGTGGACCAGAAGGCAACTTAAACCAGATTGTTACTGAACCCGATGCAAACTTTCCCCAGTTCTTGCATGAGGGGTATGTACCATGCCAAGGTCTTTACTCCCATATCAACCAGACCTTGAAGGAGGCTCACTTCAACAGCCTGCAGCAGCGAGGGCAAGCTCCAACATGA
Amino sequence
MLVLWLKRRRNGSKEGNHHSTQPKRNKRNPIFQDSQDTEFSWSDNERSSSRINIPERASGPEGNLNQIVTEPDANFPQFLHEGYVPCQGLYSHINQTLKEAHFNSLQQRGQAPT*