ENST00000173898.12 TRO

Information
Transcript ID
ENST00000173898.12
Genome
hg19
Position
chrX:54,947,257-54,957,864
Strand
+
CDS length
4,296
Amino acid length
1,432
Gene symbol
TRO
Gene type
protein-coding
Gene description
trophinin
Gene Entrez Gene ID
7216
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 54,947,257 54,947,311
2 54,948,636 54,948,724
3 54,949,011 54,950,201
4 54,950,884 54,950,988
5 54,951,103 54,951,166
6 54,951,422 54,951,501
7 54,952,025 54,952,116
8 54,952,843 54,952,922
9 54,953,016 54,953,058
10 54,953,476 54,953,538
11 54,954,100 54,954,214
12 54,955,036 54,957,464
13 54,957,637 54,957,864
CDS
Exon number Type Start Stop
2 CDS 54,948,680 54,948,724
3 CDS 54,949,011 54,950,201
4 CDS 54,950,884 54,950,988
5 CDS 54,951,103 54,951,166
6 CDS 54,951,422 54,951,501
7 CDS 54,952,025 54,952,116
8 CDS 54,952,843 54,952,922
9 CDS 54,953,016 54,953,058
10 CDS 54,953,476 54,953,538
11 CDS 54,954,100 54,954,214
12 CDS 54,955,036 54,957,453
Other genome
Genome Chromosome Start End Links
hg38 chrX 54,920,824 54,931,431 Link
CDS sequence
ATGGATAGGAGAAATGACTACGGATATAGGGTGCCTCTATTTCAGGGCCCTCTGCCTCCCCCGGGGAGCCTGGGGCTTCCCTTCCCTCCAGATATACAGACTGAGACCACAGAAGAGGACAGTGTCCTGCTGATGCATACCCTGTTGGCGGCAACCAAGGACTCCCTGGCCATGGACCCACCAGTTGTCAACCGGCCTAAGAAAAGCAAGACCAAGAAGGCCCCTATAAAGACTATTACTAAGGCTGCACCTGCTGCCCCTCCAGTCCCAGCTGCCAATGAGATTGCCACCAACAAGCCCAAAATAACTTGGCAGGCTTTAAACCTGCCAGTCATTACCCAGATCAGCCAGGCTTTACCTACCACTGAGGTAACCAATACTCAGGCTTCTTCAGTCACTGCTCAGCCTAAGAAAGCCAACAAGATGAAGAGAGTTACTGCCAAGGCAGCCCAAGGCTCCCAATCCCCAACTGGCCATGAGGGTGGCACTATACAGCTGAAGTCACCCTTGCAGGTCCTAAAGCTACCAGTCATCTCACAGAATATTCACGCTCCAATTGCCAATGAGTCAGCCAGTTCCCAAGCCTTGATAACCTCTATCAAGCCTAAGAAAGCTTCCAAGGCTAAGAAGGCTGCAAATAAGGCCATAGCTAGTGCCACCGAGGTCTCGCTGGCTGCAACTGCCACCCATACAGCTACCACCCAAGGCCAAATTACCAATGAGACAGCCAGTATCCACACCACAGCAGCCTCCATCCGAACCAAGAAAGCCTCCAAAGCCAGGAAGACAATTGCTAAGGTCATAAATACTGACACTGAGCATATAGAGGCTCTAAATGTCACTGACGCAGCTACCAGGCAGATTGAGGCCTCAGTAGTGGCTATCAGGCCCAAAAAATCCAAGGGCAAGAAGGCTGCCAGCAGGGGCCCAAATTCTGTCTCTGAGATCTCTGAGGCCCCACTTGCCACTCAGATAGTCACAAACCAAGCCCTGGCAGCCACCCTGCGGGTCAAGAGAGGGTCTAGGGCTCGGAAGGCTGCCACTAAGGCTCGGGCAACTGAAAGCCAGACTCCAAATGCTGACCAAGGGGCCCAGGCCAAGATAGCCTCTGCTCAGACCAACGTAAGTGCCCTTGAGACTCAGGTTGCTGCTGCTGTCCAGGCCCTGGCAGATGACTATCTGGCTCAGTTGAGCCTGGAGCCCACAACCAGGACCCGGGGCAAAAGAAACCGAAAGTCCAAGCATCTGAATGGGGATGAGAGAAGTGGCAGTAATTACAGGCGGATCCCATGGGGCCGGAGGCCTGCACCACCGCGAGATGTGGCCATTTTACAAGAAAGGGCTAATAAGTTGGTGAAATACCTGTTGGTTAAGGACCAGACAAAGATCCCCATCAAACGCTCAGACATGCTGAGGGATGTCATCCAAGAATATGATGAATATTTCCCAGAAATCATTGAACGAGCAAGCTACACTCTGGAGAAGATGTTTCGAGTCAATCTGAAAGAAATTGATAAGCAAAGTAGCTTGTATATTCTCATCAGCACTCAGGAATCCTCTGCAGGCATACTGGGAACGACCAAGGACACACCCAAGCTGGGTCTCCTCATGGTGATTCTGAGTGTCATTTTTATGAATGGCAACAAGGCCAGTGAGGCTGTCATCTGGGAGGTGCTGCGCAAGTTGGGGCTGCGCCCTGGGGTGAGGCATTCACTCTTTGGGGAAGTGAGGAAGCTCATCACAGACGAGTTTGTGAAGCAGAAGTACCTGGAGTACAAGAGGGTCCCTAACAGCAGACCACCTGAATATGAGTTCTTCTGGGGCTTGCGCTCCTACCACGAGACTAGCAAGATGAAAGTCCTCAAGTTTGCATGCAGGGTGCAGAAGAAAGACCCCAAGGACTGGGCTGTGCAGTACCGCGAGGCAGTGGAGATGGAAGTCCAAGCTGCAGCTGTGGCTGTGGCTGAGGCTGAAGCCAGGGCTGAGGCAAGAGCCCAAATGGGGATTGGAGAGGAAGCTGTGGCTGGGCCCTGGAATTGGGATGACATGGATATCGACTGCCTAACAAGGGAAGAGTTAGGCGATGATGCTCAGGCCTGGAGCAGATTTTCATTTGAAATTGAGGCCAGAGCCCAAGAAAATGCAGATGCCAGCACCAACGTCAACTTCAGCAGAGGAGCTAGTACCAGGGCTGGCTTCAGCGATGGTGCTAGTATTAGCTTCAATGGTGCACCCAGCTCCAGTGGTGGCTTCAGTGGTGGACCTGGCATTACCTTTGGTGTTGCACCCAGCACCAGTGCCAGCTTCAGCAATACAGCCAGCATTAGCTTTGGTGGTACACTGAGCACTAGCTCCAGCTTCAGCAGCGCAGCCAGCATTAGCTTTGGTTGTGCACACAGCACCAGCACTAGTTTCAGCAGTGAAGCCAGCATTAGCTTTGGTGGCATGCCTTGTACCAGTGCCAGCTTTAGTGGTGGAGTCAGCTCTAGTTTTAGTGGCCCACTCAGCACCAGTGCCACTTTCAGTGGTGGAGCCAGCTCTGGCTTTGGAGGCACACTCAGCACCACGGCTGGCTTTAGTGGTGTACTCAGCACTAGCACCAGCTTTGGCAGTGCACCCACAACGAGCACAGTCTTCAGTAGTGCGCTTAGCACCAGCACTGGCTTTGGAGGCATACTCAGCACCAGTGTCTGTTTTGGTGGCTCTCCCAGCTCCAGTGGTAGCTTTGGTGGTACACTCAGTACCAGTATCTGCTTCGGTGGCTCTCCCTGCACCAGCACTGGCTTTGGAGGCACACTTAGCACCAGTGTCTCCTTTGGTGGCTCTTCCAGCACCAGTGCCAATTTTGGTGGTACACTAAGTACCAGCATCTGCTTTGATGGCTCTCCCAGCACTGGTGCTGGCTTTGGTGGTGCTCTCAACACCAGTGCCAGCTTTGGCAGTGTGCTCAACACCAGTACTGGTTTTGGTGGTGCTATGAGCACCAGTGCTGACTTTGGCGGTACACTAAGCACCAGTGTCTGCTTTGGTGGCTCTCCTGGCACCAGTGTCAGCTTTGGCAGTGCACTCAACACCAATGCTGGTTATGGTGGTGCTGTCAGCACCAACACTGACTTTGGTGGTACACTAAGCACCAGCGTCTGTTTTGGTGGCTCTCCCAGCACCAGTGCTGGCTTTGGTGGTGCACTCAACACCAATGCCAGCTTTGGCTGTGCCGTCAGCACCAGTGCCAGCTTCAGTGGTGCTGTCAGCACCAGTGCTTGCTTCAGTGGTGCACCAATCACCAACCCTGGCTTTGGCGGTGCATTTAGCACCAGTGCTGGCTTCGGTGGGGCACTTAGTACCGCTGCTGACTTCGGTGGTACTCCCAGCAACAGCATTGGCTTTGGTGCTGCTCCCAGCACCAGTGTCAGCTTTGGTGGTGCTCATGGCACCAGCCTCTGTTTTGGTGGAGCTCCCAGCACCAGCCTCTGCTTTGGCAGTGCATCTAATACTAACCTATGCTTTGGTGGCCCTCCTAGCACCAGTGCCTGCTTTAGTGGTGCTACCAGCCCTAGTTTTTGTGATGGACCCAGCACCAGTACCGGTTTCAGCTTTGGCAATGGGTTAAGCACCAATGCTGGATTTGGTGGTGGACTGAACACCAGTGCTGGCTTTGGTGGTGGCCTAGGCACCAGTGCTGGCTTCAGTGGTGGCCTAAGCACAAGTTCTGGCTTTGATGGTGGGCTAGGTACCAGCGCTGGCTTCGGTGGAGGACCAGGCACCAGCACTGGTTTTGGTGGTGGACTGGGCACCAGTGCTGGCTTCAGTGGCGGACTGGGCACCAGTGCTGGCTTTGGTGGTGGACTGGTCACTAGTGATGGCTTTGGTGGTGGACTGGGCACCAATGCTAGTTTCGGCAGCACACTTGGCACCAGTGCTGGCTTTAGTGGTGGCCTCAGCACCAGCGATGGCTTTGGCAGTAGGCCTAATGCCAGCTTCGACAGAGGACTGAGTACCATCATTGGCTTTGGCAGTGGTTCCAACACCAGCACTGGCTTTACTGGCGAACCCAGCACCAGCACGGGCTTCAGTAGTGGACCCAGTTCTATTGTTGGCTTCAGCGGTGGACCAAGCACTGGTGTTGGCTTCTGCAGTGGACCAAGCACCAGTGGCTTCAGCGGTGGACCGAGCACAGGAGCTGGCTTCGGCGGTGGACCAAACACTGGTGCTGGCTTTGGTGGTGGACCGAGCACCAGTGCTGGCTTTGGCAGTGGAGCCGCCAGTCTTGGTGCCTGTGGCTTCTCGTATGGCTAG
Amino sequence
MDRRNDYGYRVPLFQGPLPPPGSLGLPFPPDIQTETTEEDSVLLMHTLLAATKDSLAMDPPVVNRPKKSKTKKAPIKTITKAAPAAPPVPAANEIATNKPKITWQALNLPVITQISQALPTTEVTNTQASSVTAQPKKANKMKRVTAKAAQGSQSPTGHEGGTIQLKSPLQVLKLPVISQNIHAPIANESASSQALITSIKPKKASKAKKAANKAIASATEVSLAATATHTATTQGQITNETASIHTTAASIRTKKASKARKTIAKVINTDTEHIEALNVTDAATRQIEASVVAIRPKKSKGKKAASRGPNSVSEISEAPLATQIVTNQALAATLRVKRGSRARKAATKARATESQTPNADQGAQAKIASAQTNVSALETQVAAAVQALADDYLAQLSLEPTTRTRGKRNRKSKHLNGDERSGSNYRRIPWGRRPAPPRDVAILQERANKLVKYLLVKDQTKIPIKRSDMLRDVIQEYDEYFPEIIERASYTLEKMFRVNLKEIDKQSSLYILISTQESSAGILGTTKDTPKLGLLMVILSVIFMNGNKASEAVIWEVLRKLGLRPGVRHSLFGEVRKLITDEFVKQKYLEYKRVPNSRPPEYEFFWGLRSYHETSKMKVLKFACRVQKKDPKDWAVQYREAVEMEVQAAAVAVAEAEARAEARAQMGIGEEAVAGPWNWDDMDIDCLTREELGDDAQAWSRFSFEIEARAQENADASTNVNFSRGASTRAGFSDGASISFNGAPSSSGGFSGGPGITFGVAPSTSASFSNTASISFGGTLSTSSSFSSAASISFGCAHSTSTSFSSEASISFGGMPCTSASFSGGVSSSFSGPLSTSATFSGGASSGFGGTLSTTAGFSGVLSTSTSFGSAPTTSTVFSSALSTSTGFGGILSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGSSSTSANFGGTLSTSICFDGSPSTGAGFGGALNTSASFGSVLNTSTGFGGAMSTSADFGGTLSTSVCFGGSPGTSVSFGSALNTNAGYGGAVSTNTDFGGTLSTSVCFGGSPSTSAGFGGALNTNASFGCAVSTSASFSGAVSTSACFSGAPITNPGFGGAFSTSAGFGGALSTAADFGGTPSNSIGFGAAPSTSVSFGGAHGTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSFCDGPSTSTGFSFGNGLSTNAGFGGGLNTSAGFGGGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFTGEPSTSTGFSSGPSSIVGFSGGPSTGVGFCSGPSTSGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGFGSGAASLGACGFSYG*