ENST00000453382.5 PRICKLE3

Information
Transcript ID
ENST00000453382.5
Genome
hg19
Position
chrX:49,031,970-49,041,242
Strand
-
CDS length
1,644
Amino acid length
548
Gene symbol
PRICKLE3
Gene type
protein-coding
Gene description
prickle planar cell polarity protein 3
Gene Entrez Gene ID
4007
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 49,031,970 49,032,614
7 49,033,252 49,033,551
6 49,034,342 49,034,528
5 49,034,621 49,034,824
4 49,035,600 49,035,737
3 49,036,042 49,036,155
2 49,040,187 49,040,370
1 49,041,078 49,041,242
CDS
Exon number Type Start Stop
8 CDS 49,032,022 49,032,614
7 CDS 49,033,252 49,033,551
6 CDS 49,034,342 49,034,528
5 CDS 49,034,621 49,034,824
4 CDS 49,035,600 49,035,737
3 CDS 49,036,042 49,036,155
2 CDS 49,040,187 49,040,294
Other genome
Genome Chromosome Start End Links
hg38 chrX 49,175,621 49,184,789 Link
CDS sequence
ATGTGTCGGCTAATCTCGGACTTCCAGCGCCACTCCATCTCCGACGACGACTCAGGCTGTGCATCGGAGGAGTATGCCTGGGTGCCCCCAGGCCTTAAGCCGGAGCAGGTATATCAATTTTTCAGCTGCCTCCCAGAGGACAAGGTCCCCTACGTCAACAGTCCTGGGGAGAAATACAGGATCAAGCAGCTGCTGCACCAGCTGCCCCCACACGACAGTGAGGCACAGTACTGCACAGCACTGGAAGAGGAGGAAAAGAAAGAGCTCCGAGCCTTTAGCCAGCAGCGGAAGCGGGAGAATCTGGGGCGTGGCATCGTGCGCATCTTCCCGGTGACCATCACTGGGGCCATCTGTGAGGAGTGCGGAAAGCAGATTGGAGGTGGGGACATCGCAGTGTTTGCCAGCCGTGCAGGCCTGGGTGCCTGCTGGCACCCACAGTGCTTCGTGTGTACCACGTGCCAGGAACTGCTGGTTGACCTCATCTACTTCTACCATGTTGGCAAGGTCTACTGCGGGCGTCACCATGCCGAATGCCTGCGTCCACGCTGCCAAGCCTGTGACGAGATCATCTTCTCCCCTGAGTGCACGGAGGCTGAGGGCCGCCACTGGCACATGGATCACTTCTGCTGCTTTGAGTGTGAAGCTTCACTAGGAGGGCAGCGCTATGTCATGCGTCAGAGCCGCCCCCACTGCTGCGCCTGCTACGAGGCCCGCCACGCGGAGTACTGTGATGGCTGTGGGGAGCACATCGGCCTGGACCAAGGCCAGATGGCTTACGAGGGCCAGCACTGGCATGCCTCAGACCGCTGCTTCTGCTGTAGTCGCTGTGGGCGGGCCCTGCTGGGCCGCCCATTCCTGCCACGCCGAGGCCTAATCTTCTGCTCTCGAGCCTGCAGCCTTGGGTCCGAGCCCACAGCTCCAGGGCCGAGCCGCCGCAGCTGGAGTGCCGGCCCTGTCACAGCCCCACTTGCAGCCTCCACAGCCTCTTTCTCTGCTGTGAAGGGGGCATCAGAGACCACCACCAAAGGCACCAGCACAGAGTTAGCGCCAGCTACAGGCCCTGAGGAGCCCTCCCGCTTTCTGAGAGGGGCTCCCCACCGCCACTCCATGCCGGAACTGGGGCTCCGCAGTGTCCCCGAGCCGCCCCCAGAGTCCCCCGGCCAGCCTAACCTGCGCCCAGATGATAGTGCCTTCGGTCGTCAGAGCACCCCACGCGTCAGCTTCCGCGACCCTCTGGTGTCTGAAGGAGGCCCGCGCCGGACCCTGAGTGCACCCCCGGCCCAGCGCCGCAGGCCACGCAGTCCCCCACCCAGGGCCCCCAGCCGTCGCCGCCACCATCATCATAATCACCATCACCATCACAACCGCCACCCAAGCAGACGTCGCCACTATCAATGTGACGCGGGATCAGGGTCAGACTCGGAATCTTGCTCCAGCTCGCCCTCCAGTTCCAGTTCCGAATCATCAGAGGATGATGGCTTCTTCCTAGGAGAGCGCATCCCTCTGCCCCCGCATTTGTGCAGGCCCATGCCTGCTCAGGACACTGCAATGGAGACCTTCAACTCCCCATCTTTATCGCTCCCCAGGGACTCTCGCGCAGGGATGCCTCGTCAGGCCCGAGACAAGAACTGCATCGTGGCTTGA
Amino sequence
MCRLISDFQRHSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKVPYVNSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQACDEIIFSPECTEAEGRHWHMDHFCCFECEASLGGQRYVMRQSRPHCCACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHASDRCFCCSRCGRALLGRPFLPRRGLIFCSRACSLGSEPTAPGPSRRSWSAGPVTAPLAASTASFSAVKGASETTTKGTSTELAPATGPEEPSRFLRGAPHRHSMPELGLRSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPLVSEGGPRRTLSAPPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCDAGSGSDSESCSSSPSSSSSESSEDDGFFLGERIPLPPHLCRPMPAQDTAMETFNSPSLSLPRDSRAGMPRQARDKNCIVA*