ENST00000599218.6 PRICKLE3

Information
Transcript ID
ENST00000599218.6
Genome
hg19
Position
chrX:49,031,151-49,042,826
Strand
-
CDS length
1,848
Amino acid length
616
Gene symbol
PRICKLE3
Gene type
protein-coding
Gene description
prickle planar cell polarity protein 3
Gene Entrez Gene ID
4007
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 49,031,151 49,032,614
8 49,033,252 49,033,551
7 49,034,342 49,034,528
6 49,034,621 49,034,824
5 49,035,600 49,035,737
4 49,036,042 49,036,155
3 49,040,187 49,040,370
2 49,041,078 49,041,163
1 49,042,709 49,042,826
CDS
Exon number Type Start Stop
9 CDS 49,032,022 49,032,614
8 CDS 49,033,252 49,033,551
7 CDS 49,034,342 49,034,528
6 CDS 49,034,621 49,034,824
5 CDS 49,035,600 49,035,737
4 CDS 49,036,042 49,036,155
3 CDS 49,040,187 49,040,370
2 CDS 49,041,078 49,041,163
1 CDS 49,042,709 49,042,750
Other genome
Genome Chromosome Start End Links
hg38 chrX 49,174,802 49,186,373 Link
CDS sequence
ATGTTCGCGCGTGGGTCCCGGAGGCGCCGCTCCGGGCGTGCGCCTCCAGAGGCAGAGGACCCAGACCGGGGCCAGCCCTGCAACTCCTGTAGGGAGCAGTGCCCTGGCTTCCTGCTCCACGGCTGGAGAAAGATCTGCCAGCATTGCAAATGCCCGCGGGAGGAGCATGCAGTGCACGCGGTGCCTGTGGACCTGGAACGCATCATGTGTCGGCTAATCTCGGACTTCCAGCGCCACTCCATCTCCGACGACGACTCAGGCTGTGCATCGGAGGAGTATGCCTGGGTGCCCCCAGGCCTTAAGCCGGAGCAGGTATATCAATTTTTCAGCTGCCTCCCAGAGGACAAGGTCCCCTACGTCAACAGTCCTGGGGAGAAATACAGGATCAAGCAGCTGCTGCACCAGCTGCCCCCACACGACAGTGAGGCACAGTACTGCACAGCACTGGAAGAGGAGGAAAAGAAAGAGCTCCGAGCCTTTAGCCAGCAGCGGAAGCGGGAGAATCTGGGGCGTGGCATCGTGCGCATCTTCCCGGTGACCATCACTGGGGCCATCTGTGAGGAGTGCGGAAAGCAGATTGGAGGTGGGGACATCGCAGTGTTTGCCAGCCGTGCAGGCCTGGGTGCCTGCTGGCACCCACAGTGCTTCGTGTGTACCACGTGCCAGGAACTGCTGGTTGACCTCATCTACTTCTACCATGTTGGCAAGGTCTACTGCGGGCGTCACCATGCCGAATGCCTGCGTCCACGCTGCCAAGCCTGTGACGAGATCATCTTCTCCCCTGAGTGCACGGAGGCTGAGGGCCGCCACTGGCACATGGATCACTTCTGCTGCTTTGAGTGTGAAGCTTCACTAGGAGGGCAGCGCTATGTCATGCGTCAGAGCCGCCCCCACTGCTGCGCCTGCTACGAGGCCCGCCACGCGGAGTACTGTGATGGCTGTGGGGAGCACATCGGCCTGGACCAAGGCCAGATGGCTTACGAGGGCCAGCACTGGCATGCCTCAGACCGCTGCTTCTGCTGTAGTCGCTGTGGGCGGGCCCTGCTGGGCCGCCCATTCCTGCCACGCCGAGGCCTAATCTTCTGCTCTCGAGCCTGCAGCCTTGGGTCCGAGCCCACAGCTCCAGGGCCGAGCCGCCGCAGCTGGAGTGCCGGCCCTGTCACAGCCCCACTTGCAGCCTCCACAGCCTCTTTCTCTGCTGTGAAGGGGGCATCAGAGACCACCACCAAAGGCACCAGCACAGAGTTAGCGCCAGCTACAGGCCCTGAGGAGCCCTCCCGCTTTCTGAGAGGGGCTCCCCACCGCCACTCCATGCCGGAACTGGGGCTCCGCAGTGTCCCCGAGCCGCCCCCAGAGTCCCCCGGCCAGCCTAACCTGCGCCCAGATGATAGTGCCTTCGGTCGTCAGAGCACCCCACGCGTCAGCTTCCGCGACCCTCTGGTGTCTGAAGGAGGCCCGCGCCGGACCCTGAGTGCACCCCCGGCCCAGCGCCGCAGGCCACGCAGTCCCCCACCCAGGGCCCCCAGCCGTCGCCGCCACCATCATCATAATCACCATCACCATCACAACCGCCACCCAAGCAGACGTCGCCACTATCAATGTGACGCGGGATCAGGGTCAGACTCGGAATCTTGCTCCAGCTCGCCCTCCAGTTCCAGTTCCGAATCATCAGAGGATGATGGCTTCTTCCTAGGAGAGCGCATCCCTCTGCCCCCGCATTTGTGCAGGCCCATGCCTGCTCAGGACACTGCAATGGAGACCTTCAACTCCCCATCTTTATCGCTCCCCAGGGACTCTCGCGCAGGGATGCCTCGTCAGGCCCGAGACAAGAACTGCATCGTGGCTTGA
Amino sequence
MFARGSRRRRSGRAPPEAEDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQRHSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKVPYVNSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQACDEIIFSPECTEAEGRHWHMDHFCCFECEASLGGQRYVMRQSRPHCCACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHASDRCFCCSRCGRALLGRPFLPRRGLIFCSRACSLGSEPTAPGPSRRSWSAGPVTAPLAASTASFSAVKGASETTTKGTSTELAPATGPEEPSRFLRGAPHRHSMPELGLRSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPLVSEGGPRRTLSAPPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCDAGSGSDSESCSSSPSSSSSESSEDDGFFLGERIPLPPHLCRPMPAQDTAMETFNSPSLSLPRDSRAGMPRQARDKNCIVA*