ENST00000612497.1 SSX3
Information
- Transcript ID
- ENST00000612497.1
- Genome
- hg19
- Position
- chrX:48,208,881-48,214,707
- Strand
- -
- CDS length
- 609
- Amino acid length
- 203
- Gene symbol
- SSX3
- Gene type
- protein-coding
- Gene description
- SSX family member 3
- Gene Entrez Gene ID
- 10214
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 48,208,881 | 48,209,557 |
| 4 | 48,211,535 | 48,211,584 |
| 3 | 48,213,434 | 48,213,529 |
| 2 | 48,214,067 | 48,214,181 |
| 1 | 48,214,616 | 48,214,707 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 48,209,279 | 48,209,557 |
| 4 | CDS | 48,211,535 | 48,211,584 |
| 3 | CDS | 48,213,434 | 48,213,529 |
| 2 | CDS | 48,214,067 | 48,214,181 |
| 1 | CDS | 48,214,616 | 48,214,684 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chrX | 48,349,446 | 48,355,272 | Link |
CDS sequence
ATGAACGGAGATGACACCTTTGCAAGGAGACCCACGGTTGGTGCTCAAATACCAGAGAAGATACAAAAGGCCTTCGATGATATTGCCAAATACTTCTCTAAGGAAGAGTGGGAAAAGATGAAAGTCTCGGAGAAAATCGTCTATGTGTATATGAAGAGAAAGTATGAGGCCATGACTAAACTAGGTTTCAAGGCCATCCTCCCATCTTTCATGCGTAATAAACGGGTCACAGACTTCCAGGGGAATGATTTTGATAATGACCCTAACCGTGGGAATCAGGTTCAACGTCCTCAGATGACTTTCGGCAGGCTCCAGGGAATCTTCCCGAAGATCATGCCCAAGAAGCCAGCAGAGGAAGGAAATGTTTCGAAGGAAGTGCCAGAAGCATCTGGCCCACAAAACGATGGGAAACAGCTGTGCCCCCCGGGAAAACCAACTACCTCTGAGAAGATTAACATGATATCTGGTAAGAGGAAGCAATTCAGGAACAATCCCACTGGCTTCCCTGGCGACGTTCAGGTGTGTGGACTGGGTGTGTGGCATGGATCCCAGATAACCCTGGGTCCAGGCTGGGCTGAGGAGCTTGCCCAGCTCCAGATGAGATGTTAG
Amino sequence
MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGKRKQFRNNPTGFPGDVQVCGLGVWHGSQITLGPGWAEELAQLQMRC*