ENST00000372469.6 PRRX2
Information
- Transcript ID
- ENST00000372469.6
- Genome
- hg38
- Position
- chr9:129,665,647-129,722,674
- Strand
- +
- CDS length
- 762
- Amino acid length
- 254
- Gene symbol
- PRRX2
- Gene type
- protein-coding
- Gene description
- paired related homeobox 2
- Gene Entrez Gene ID
- 51450
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 129,665,647 | 129,666,126 |
| 2 | 129,719,231 | 129,719,418 |
| 3 | 129,720,596 | 129,720,774 |
| 4 | 129,722,217 | 129,722,674 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 129,665,868 | 129,666,126 |
| 2 | CDS | 129,719,231 | 129,719,418 |
| 3 | CDS | 129,720,596 | 129,720,774 |
| 4 | CDS | 129,722,217 | 129,722,352 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr9 | 132,427,926 | 132,484,953 | Link |
CDS sequence
ATGGACAGCGCGGCCGCCGCCTTCGCCCTGGACAAGCCGGCGCTGGGCCCGGGGCCGCCGCCGCCTCCACCCGCGCTGGGGCCCGGCGACTGCGCCCAGGCGCGCAAGAACTTCTCGGTGAGCCACCTCCTGGACCTGGAAGAGGTGGCGGCGGCCGGGCGGCTGGCGGCGCGCCCCGGGGCCAGGGCCGAGGCGCGGGAGGGCGCAGCACGGGAGCCGTCCGGGGGCAGCAGCGGCAGCGAGGCGGCGCCGCAGGATGGTGAGTGTCCCAGCCCGGGGCGCGGTAGCGCCGCCAAGCGGAAGAAGAAGCAGCGGCGGAACCGCACCACGTTCAACAGCAGCCAACTGCAGGCGCTGGAGCGCGTGTTCGAGCGCACGCACTACCCCGACGCCTTTGTGCGCGAGGAGCTTGCCCGGCGCGTCAACCTCAGCGAGGCGCGCGTTCAGGTCTGGTTTCAGAACCGCCGCGCCAAGTTCCGCAGGAATGAAAGGGCCATGCTGGCCAGCCGCTCTGCCTCGCTGCTCAAGTCCTACAGCCAGGAGGCCGCCATCGAGCAGCCCGTGGCTCCCCGGCCCACCGCCCTGAGTCCAGATTATCTCTCCTGGACAGCCTCGTCCCCCTACAGCACAGTGCCACCCTACAGCCCTGGGAGCTCAGGCCCCGCAACCCCAGGGGTCAACATGGCCAACAGCATCGCCAGCCTCCGTCTCAAGGCCAAGGAGTTCAGCCTGCACCACAGCCAGGTGCCTACGGTGAACTGA
Amino sequence
MDSAAAAFALDKPALGPGPPPPPPALGPGDCAQARKNFSVSHLLDLEEVAAAGRLAARPGARAEAREGAAREPSGGSSGSEAAPQDGECPSPGRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLASRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPATPGVNMANSIASLRLKAKEFSLHHSQVPTVN*