ENST00000398048.4 SCML2

Information
Transcript ID
ENST00000398048.4
Genome
hg19
Position
chrX:18,257,438-18,264,875
Strand
-
CDS length
417
Amino acid length
139
Gene symbol
SCML2
Gene type
protein-coding
Gene description
Scm polycomb group protein like 2
Gene Entrez Gene ID
10389
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 18,257,438 18,258,073
3 18,259,133 18,259,499
2 18,260,559 18,260,710
1 18,264,697 18,264,875
CDS
Exon number Type Start Stop
3 CDS 18,259,371 18,259,499
2 CDS 18,260,559 18,260,710
1 CDS 18,264,697 18,264,832
Other genome
Genome Chromosome Start End Links
hg38 chrX 18,239,318 18,246,755 Link
CDS sequence
ATGTATATTCATACTTCAGTCTCCCAGGATTTTTCTCGAAGTGTGCCAGGCACCACAAGTTCACCACTAGTTGGGGACATATCCCCCAAGAGCAGTCCCCATGAAGTTAAATTCCAAATGCAGAGGAAAAGTGAAGCTCCAAGTTATATAGCTGTACCTGATCCCAGTGTCCTGAAACAAGGCTTCTCTAAGGACCCTTCAACCTGGTCTGTGGATGAAGTGATACAGTTTATGAAACATACAGATCCTCAGATATCAGGCCCCCTCGCCGACCTCTTCAGGCAACATGAAATTGATGGGAAGGCTCTGTTCCTACTCAAGAGTGATGTGATGATGAAGTATATGGGGCTGAAGCTGGGGCCAGCATTAAAGCTGTGTTACTACATTGAAAAGCTTAAAGAAGGAAAATACAGTTAA
Amino sequence
MYIHTSVSQDFSRSVPGTTSSPLVGDISPKSSPHEVKFQMQRKSEAPSYIAVPDPSVLKQGFSKDPSTWSVDEVIQFMKHTDPQISGPLADLFRQHEIDGKALFLLKSDVMMKYMGLKLGPALKLCYYIEKLKEGKYS*