ENST00000486446.3 PUDP
Information
- Transcript ID
- ENST00000486446.3
- Genome
- hg19
- Position
- chrX:6,975,748-7,066,166
- Strand
- -
- CDS length
- 627
- Amino acid length
- 209
- Gene symbol
- PUDP
- Gene type
- protein-coding
- Gene description
- pseudouridine 5'-phosphatase
- Gene Entrez Gene ID
- 8226
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 6,975,748 | 6,975,864 |
| 3 | 6,995,261 | 6,995,490 |
| 2 | 7,023,661 | 7,023,879 |
| 1 | 7,066,094 | 7,066,166 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 6,975,748 | 6,975,864 |
| 3 | CDS | 6,995,261 | 6,995,490 |
| 2 | CDS | 7,023,661 | 7,023,879 |
| 1 | CDS | 7,066,094 | 7,066,154 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chrX | 7,057,707 | 7,148,125 | Link |
CDS sequence
ATGGCGGCGCCCCCGCAGCCCGTCACCCACCTCATCTTTGACATGGACGGACTTCTTCTGGATACTGAACGGCTGTATTCAGTGGTGTTTCAAGAAATATGTAATCGCTATGACAAGAAATACAGCTGGGATGTAAAGTCCCTGGTTATGGGTAAGAAGGCATTAGAGGCGGCACAGATTATAATAGACGTCTTGCAGCTCCCGATGTCCAAAGAGGAGCTGGTGGAAGAAAGCCAAACGAAGTTAAAGGAAGTGTTCCCCACGGCTGCGCTCATGCCAGGGGCGGAGAAACTCATCATCCACCTGCGGAAACATGGCATCCCCTTTGCACTGGCCACCAGCTCGGGGTCCGCGTCGTTCGATATGAAGACAAGCCGCCACAAGGAGTTCTTCAGCTTGTTTTCCCACATTGTGCTGGGAGATGACCCCGAAGTGCAGCATGGCAAGCCAGACCCGGACATCTTCCTAGCTTGTGCCAAGAGGTTCTCTCCCCCTCCTGCTATGGAGAAGAGCTCCATCCATAGACCTCGTCTGCTCACCGCACAGAAATGCCAGGGCTGCCGGGATCCCTTCTCAGCGCTCCTCCTTCTGTGTAATCAACTGCTTCTCTGCTCTGATGACACCTGA
Amino sequence
MAAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKSSIHRPRLLTAQKCQGCRDPFSALLLLCNQLLLCSDDT*