ENST00000381176.5 SHISAL1
Information
- Transcript ID
- ENST00000381176.5
- Genome
- hg19
- Position
- chr22:44,639,545-44,708,831
- Strand
- -
- CDS length
- 600
- Amino acid length
- 200
- Gene symbol
- SHISAL1
- Gene type
- protein-coding
- Gene description
- shisa like 1
- Gene Entrez Gene ID
- 85352
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 44,639,545 | 44,645,565 |
| 4 | 44,681,308 | 44,681,625 |
| 3 | 44,692,552 | 44,692,765 |
| 2 | 44,696,759 | 44,696,857 |
| 1 | 44,708,631 | 44,708,831 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 44,645,565 | 44,645,565 |
| 4 | CDS | 44,681,308 | 44,681,625 |
| 3 | CDS | 44,692,552 | 44,692,765 |
| 2 | CDS | 44,696,759 | 44,696,825 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr22 | 44,243,665 | 44,312,951 | Link |
CDS sequence
ATGACCAGTTGTGGCCAGCAGTCCTTGAACGTGCTCGCCGTCCTCTTCTCATTGCTGTTTTCTGCAGTCTTGTCTGCACATTTCCGGGTCTGTGAACCATACACAGACCACAAAGGCCGCTACCACTTTGGCTTCCACTGCCCCCGGCTCTCGGACAACAAGACCTTCATCCTCTGTTGTCACCATAACAACACGGTCTTCAAATACTGCTGCAACGAGACGGAGTTCCAGGCGGTGATGCAGGCGAACCTCACGGCCAGCTCCGAGGGTTACATGCACAACAATTACACCGCCTTGTTGGGAGTGTGGATCTATGGATTTTTCGTGTTGATGCTGCTGGTTCTGGACCTTTTGTATTACTCGGCAATGAACTACGACATCTGCAAGGTCTACCTGGCACGGTGGGGCATCCAAGGACGATGGATGAAACAGGACCCCCGGCGGTGGGGGAACCCCGCTCGGGCCCCTCGGCCGGGTCAGCGGGCCCCACAGCCGCAGCCTCCCCCAGGCCCGCTGCCACAAGCCCCACAGGCCGTGCACACATTGCGGGGAGATGCTCACAGCCCACCGCTGATGACCTTCCAGAGTTCGTCTGCCTGA
Amino sequence
MTSCGQQSLNVLAVLFSLLFSAVLSAHFRVCEPYTDHKGRYHFGFHCPRLSDNKTFILCCHHNNTVFKYCCNETEFQAVMQANLTASSEGYMHNNYTALLGVWIYGFFVLMLLVLDLLYYSAMNYDICKVYLARWGIQGRWMKQDPRRWGNPARAPRPGQRAPQPQPPPGPLPQAPQAVHTLRGDAHSPPLMTFQSSSA*