ENST00000338758.12 PARVB
Information
- Transcript ID
- ENST00000338758.12
- Genome
- hg19
- Position
- chr22:44,420,182-44,568,819
- Strand
- +
- CDS length
- 1,095
- Amino acid length
- 365
- Gene symbol
- PARVB
- Gene type
- protein-coding
- Gene description
- parvin beta
- Gene Entrez Gene ID
- 29780
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 44,420,182 | 44,420,331 |
| 2 | 44,489,808 | 44,489,897 |
| 3 | 44,495,933 | 44,496,003 |
| 4 | 44,514,918 | 44,515,020 |
| 5 | 44,527,367 | 44,527,507 |
| 6 | 44,528,774 | 44,528,889 |
| 7 | 44,532,340 | 44,532,398 |
| 8 | 44,536,004 | 44,536,023 |
| 9 | 44,543,741 | 44,543,802 |
| 10 | 44,547,363 | 44,547,431 |
| 11 | 44,553,862 | 44,553,963 |
| 12 | 44,559,738 | 44,559,810 |
| 13 | 44,564,482 | 44,568,819 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 44,420,220 | 44,420,331 |
| 2 | CDS | 44,489,808 | 44,489,897 |
| 3 | CDS | 44,495,933 | 44,496,003 |
| 4 | CDS | 44,514,918 | 44,515,020 |
| 5 | CDS | 44,527,367 | 44,527,507 |
| 6 | CDS | 44,528,774 | 44,528,889 |
| 7 | CDS | 44,532,340 | 44,532,398 |
| 8 | CDS | 44,536,004 | 44,536,023 |
| 9 | CDS | 44,543,741 | 44,543,802 |
| 10 | CDS | 44,547,363 | 44,547,431 |
| 11 | CDS | 44,553,862 | 44,553,963 |
| 12 | CDS | 44,559,738 | 44,559,810 |
| 13 | CDS | 44,564,482 | 44,564,558 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr22 | 44,024,302 | 44,172,939 | Link |
CDS sequence
ATGTCCTCCGCGCCGCGCTCGCCCACCCCGCGGCCCCGCAGGATGAAGAAGGACGAGTCGTTCCTGGGCAAGCTGGGCGGCACCCTGGCCAGGAAGCGGAGGGCGCGCGAGGTGAGTGACCTGCAGGAAGAAGGCAAGAATGCCATCAACTCACCGATGTCCCCCGCCCTGGTGGATGTTCACCCTGAAGACACCCAGCTTGAGGAGAACGAGGAGCGCACGATGATTGACCCCACTTCCAAGGAAGACCCCAAGTTCAAGGAACTGGTCAAGGTCCTCCTCGACTGGATTAATGACGTGCTGGTGGAGGAGAGGATCATTGTGAAGCAGCTGGAGGAAGACCTGTATGACGGCCAGGTGCTGCAGAAGCTCTTGGAAAAACTGGCAGGGTGCAAGCTGAATGTGGCTGAGGTGACACAGTCCGAAATAGGGCAGAAACAGAAGCTGCAGACGGTGCTGGAAGCAGTACATGACCTGCTGCGGCCCCGAGGCTGGGCGCTCCGGTGGAGCGTGGACTCAATTCACGGGAAGAACCTGGTGGCCATCCTCCACCTGCTGGTCTCTCTGGCCATGCACTTCAGGGCCCCCATCCGCCTTCCTGAGCATGTAACGGTGCAGGTGGTGGTCGTGCGGAAACGGGAAGGCCTGCTGCATTCCAGCCACATCTCGGAGGAGCTGACCACAACTACAGAGATGATGATGGGCCGGTTCGAGCGGGATGCCTTCGACACGCTGTTCGACCACGCCCCGGATAAGCTCAGCGTGGTGAAGAAGTCTCTCATCACTTTTGTGAACAAGCACCTGAACAAGCTGAATTTGGAGGTGACGGAACTGGAGACCCAGTTTGCAGATGGCGTGTACCTGGTTCTGCTCATGGGCCTTCTGGAAGACTACTTTGTTCCTCTCCACCACTTCTACCTGACTCCGGAAAGCTTCGATCAGAAGGTCCACAATGTGTCCTTCGCCTTTGAGCTGATGCTGGACGGAGGCCTCAAGAAACCCAAGGCTCGTCCTGAAGACGTGGTTAACTTGGACCTCAAATCCACCCTGAGGGTTCTTTACAACCTGTTCACCAAGTACAAGAACGTGGAGTGA
Amino sequence
MSSAPRSPTPRPRRMKKDESFLGKLGGTLARKRRAREVSDLQEEGKNAINSPMSPALVDVHPEDTQLEENEERTMIDPTSKEDPKFKELVKVLLDWINDVLVEERIIVKQLEEDLYDGQVLQKLLEKLAGCKLNVAEVTQSEIGQKQKLQTVLEAVHDLLRPRGWALRWSVDSIHGKNLVAILHLLVSLAMHFRAPIRLPEHVTVQVVVVRKREGLLHSSHISEELTTTTEMMMGRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQKVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYKNVE*