ENST00000221899.7 CACTIN
Information
- Transcript ID
- ENST00000221899.7
- Genome
- hg38
- Position
- chr19:3,610,660-3,626,815
- Strand
- -
- CDS length
- 2,277
- Amino acid length
- 759
- Gene symbol
- CACTIN
- Gene type
- protein-coding
- Gene description
- cactin, spliceosome C complex subunit
- Gene Entrez Gene ID
- 58509
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
12 | 3,610,660 | 3,610,971 |
11 | 3,611,229 | 3,611,364 |
10 | 3,611,904 | 3,612,413 |
9 | 3,613,058 | 3,613,365 |
8 | 3,613,464 | 3,613,586 |
7 | 3,614,397 | 3,614,589 |
6 | 3,618,875 | 3,618,989 |
5 | 3,619,080 | 3,619,242 |
4 | 3,620,127 | 3,620,272 |
3 | 3,620,707 | 3,620,802 |
2 | 3,623,688 | 3,624,162 |
1 | 3,626,596 | 3,626,815 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
10 | CDS | 3,611,923 | 3,612,413 |
9 | CDS | 3,613,058 | 3,613,365 |
8 | CDS | 3,613,464 | 3,613,586 |
7 | CDS | 3,614,397 | 3,614,589 |
6 | CDS | 3,618,875 | 3,618,989 |
5 | CDS | 3,619,080 | 3,619,242 |
4 | CDS | 3,620,127 | 3,620,272 |
3 | CDS | 3,620,707 | 3,620,802 |
2 | CDS | 3,623,688 | 3,624,162 |
1 | CDS | 3,626,596 | 3,626,762 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr19 | 3,610,658 | 3,626,813 | Link |
CDS sequence
ATGGGTCGGGACACACGCTCGCGCTCGCGGTCCGCGGGTCGCCGGGGCCGAAGGCGGCAGAGTCAGAGCGGGAGCCGAAGTCGGAGCAGGAGCCATGGGCGGCGAAACCGACGGCGCCGGGAGGACGAGGGACGGCGCAGACGGAGGCGGCGGAGCCGGGAGCGCAGGTCAGATTCAGAGGAAGAGCGGTGGCAGCGCTCAGGGATGCGAAGCCGGAGCCCCCCGCGGCCCAAGTGGCACTCAAGAGATGGGTCCTCTCAGTCGGACTCAGGAGAGGAGCAGTCACGGGGCCAGTGGGCTCGCCGGCGACGGCGCGCACGCTCGTGGTCTCCTAGCTCCTCAGCATCCAGCTCCGCGTCTCCAGGGCGATCCCAGAGCCCCCGGGCGGCCGCGGCTGCCCTGAGCCAGCAGCAGAGCCTGCAGGAGCGGCTGCGGCTGCGGGAGGAGCGGAAGCAGCAGGAGGAGCTGATGAAGGCCTTCGAGACGCCCGAGGAGAAGCGCGCACGGCGGCTGGCCAAGAAGGAGGCCAAGGAGCGCAAGAAGCGGGAGAAGATGGGCTGGGGTGAGGAGTACATGGGCTACACCAACACCGACAACCCCTTCGGAGACAACAACCTGCTGGGCACCTTCATCTGGAATAAGGCCCTGGAGAAGAAGGGGATCAGCCACCTGGAGGAGAAGGAGCTGAAGGAGCGGAACAAGAGGATCCAGGAGGACAACCGGCTGGAGCTGCAGAAGGTGAAGCAGCTGCGGCTGGAGCGGGAGCGGGAGAAGGCCATGCGCGAGCAGGAGCTGGAGATGCTGCAGCGCGAGAAGGAGGCAGAGCACTTCAAGACATGGGAGGAGCAGGAGGACAACTTCCACCTCCAGCAGGCCAAGCTGCGTTCCAAGATCCGCATCCGGGACGGGCGGGCCAAGCCCATCGACCTGCTGGCCAAGTACATCAGCGCTGAGGATGACGATCTGGCCGTGGAGATGCATGAGCCCTACACGTTCCTCAACGGCCTCACCGTGGCCGACATGGAGGACCTGCTGGAGGATATCCAGGTCTACATGGAGCTGGAGCAGGGCAAGAACGCCGACTTCTGGCGGGACATGACCACCATCACCGAGGACGAGATCTCCAAGCTCCGCAAGCTGGAGGCCTCGGGCAAGGGGCCAGGTGAGCGCCGCGAGGGGGTCAACGCCTCCGTCAGCTCTGATGTGCAGTCGGTGTTCAAGGGGAAGACATACAACCAGCTGCAGGTCATCTTCCAGGGCATCGAGGGCAAAATCCGCGCTGGTGGCCCCAACCTGGACATGGGCTACTGGGAGAGCCTCCTGCAGCAGCTTCGTGCCCACATGGCACGGGCCCGGCTGCGTGAGCGCCACCAGGACGTGCTGCGGCAGAAGCTGTACAAACTGAAGCAGGAGCAGGGCGTGGAGAGCGAGCCGCTGTTCCCCATCCTCAAGCAGGAGCCCCAGTCCCCCAGCCGCAGCCTGGAGCCTGAGGACGCGGCGCCCACCCCGCCCGGGCCCTCCTCGGAGGGCGGCCCCGCGGAGGCCGAGGTGGACGGCGCGACCCCGACAGAGGGCGACGGCGACGGGGACGGTGAGGGCGAGGGCGAGGGCGAGGCGGTGCTCATGGAGGAGGACCTGATCCAGCAGAGCCTGGACGACTACGACGCCGGCAGGTACAGCCCGCGGCTGCTCACGGCGCACGAGCTGCCACTGGACGCGCACGTGCTGGAACCGGATGAGGACCTGCAGCGCCTGCAGCTCTCGCGCCAGCAGCTCCAGGTCACGGGAGACGCCAGCGAGAGCGCCGAGGACATCTTCTTCCGGCGGGCCAAGGAGGGCATGGGCCAGGACGAGGCGCAGTTCAGCGTGGAGATGCCACTCACCGGCAAGGCCTACCTGTGGGCCGACAAGTACCGGCCACGCAAGCCGCGCTTCTTCAACCGCGTGCACACGGGCTTCGAGTGGAACAAGTACAACCAGACGCACTACGACTTTGACAACCCACCGCCCAAGATCGTGCAGGGATACAAGTTCAACATCTTCTACCCCGACCTCATCGACAAGCGCTCCACGCCCGAGTACTTCCTGGAGGCCTGCGCCGACAACAAGGATTTCGCCATCCTGCGCTTCCACGCGGGGCCGCCCTACGAGGACATCGCTTTCAAGATCGTCAACCGCGAGTGGGAATACTCGCACCGCCACGGCTTCCGCTGCCAGTTTGCCAACGGCATCTTCCAGCTGTGGTTTCACTTCAAGCGCTACCGCTATCGGCGGTGA
Amino sequence
MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRIRDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGKNADFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQGIEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLFPILKQEPQSPSRSLEPEDAAPTPPGPSSEGGPAEAEVDGATPTEGDGDGDGEGEGEGEAVLMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHVLEPDEDLQRLQLSRQQLQVTGDASESAEDIFFRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIAFKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR*