ENST00000216099.13 APOBEC3D
Information
- Transcript ID
- ENST00000216099.13
- Genome
- hg19
- Position
- chr22:39,417,132-39,429,282
- Strand
- +
- CDS length
- 1,161
- Amino acid length
- 387
- Gene symbol
- APOBEC3D
- Gene type
- protein-coding
- Gene description
- apolipoprotein B mRNA editing enzyme catalytic subunit 3D
- Gene Entrez Gene ID
- 140564
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 39,417,132 | 39,417,541 |
| 2 | 39,418,827 | 39,419,019 |
| 3 | 39,421,075 | 39,421,354 |
| 4 | 39,421,562 | 39,421,676 |
| 5 | 39,425,368 | 39,425,524 |
| 6 | 39,427,699 | 39,427,978 |
| 7 | 39,428,203 | 39,429,282 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 39,417,525 | 39,417,541 |
| 2 | CDS | 39,418,827 | 39,419,019 |
| 3 | CDS | 39,421,075 | 39,421,354 |
| 4 | CDS | 39,421,562 | 39,421,676 |
| 5 | CDS | 39,425,368 | 39,425,524 |
| 6 | CDS | 39,427,699 | 39,427,978 |
| 7 | CDS | 39,428,203 | 39,428,321 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr22 | 39,021,127 | 39,033,277 | Link |
CDS sequence
ATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACAGGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGAACCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACCTGGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGTCACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTCAGGCTGCATAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAATGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGATTCTCAGAAACCCGATGGAGGCAATGTACCCACACATATTCTACTTCCACTTTAAAAACCTACTGAAAGCCTGTGGTCGGAACGAAAGCTGGCTGTGCTTCACCATGGAAGTTACAAAGCACCACTCAGCTGTCTTCCGGAAGAGGGGCGTCTTCCGAAACCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTACTTCTGGGATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCTACAAAGATTTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTACAAACCAACTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAGTGA
Amino sequence
MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ*