ENST00000616056.4 APOL4
Information
- Transcript ID
- ENST00000616056.4
- Genome
- hg19
- Position
- chr22:36,585,177-36,600,886
- Strand
- -
- CDS length
- 1,045
- Amino acid length
- 348.333
- Gene symbol
- APOL4
- Gene type
- protein-coding
- Gene description
- apolipoprotein L4
- Gene Entrez Gene ID
- 80832
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 36,585,177 | 36,587,845 |
| 6 | 36,587,846 | 36,587,958 |
| 5 | 36,591,357 | 36,591,483 |
| 4 | 36,595,376 | 36,595,422 |
| 3 | 36,597,746 | 36,597,934 |
| 2 | 36,598,039 | 36,598,101 |
| 1 | 36,600,674 | 36,600,886 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 36,587,123 | 36,587,845 |
| 6 | CDS | 36,587,846 | 36,587,958 |
| 5 | CDS | 36,591,357 | 36,591,483 |
| 4 | CDS | 36,595,376 | 36,595,422 |
| 3 | CDS | 36,597,746 | 36,597,780 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr22 | 36,189,129 | 36,204,840 | Link |
CDS sequence
ATGGGATCCTGGGTGCAGCTCATCACAAGCGTCGGGGTGCAGCAAAACCATCCAGGCTGGACAGTGGCTGGACAGTTCCAAGAAAAGAAACGCTTCACTGAAGAAGTCATTGAATACTTCCAGAAGAAAGTTAGCCCAGTGCATCTGAAAATCCTGCTGACTAGCGATGAAGCCTGGAAGAGATTTGTGCGTGTGGCTGAATTGCCCAGGGAAGAGGCAGATGCTCTCTATGAAGCTCTGAAGAATCTTACACCATATGTGGCTATTGAGGACAAAGACATGCAGCAAAAAGAACAGCAGTTTAGGGAGTGGTTTTTGAAAGTTTCCTCAAATCAGATGGAAGATTCAGGAGTCCATAGAAAGGCTTCGTGTCATTGCAAATGAGATTGAAAAGGTCCACAGAGGCTGCGTCATCGCCAATGTGGTGTCTGGCTCCACTGGCATCCTGTCTGTCATTGGCGTTATGTTGGCACCATTTACAGCAGGGCTGAGCCTGAGCATTACTGCAGCTGGGGTAGGGCTGGGAATAGCATCTGCCACGGCTGGGATCGCCTCCAGCATCGTGGAGAACACATACACAAGGTCAGCAGAACTCACAGCCAGCAGGCTGACTGCAACCAGCACTGACCAATTGGAGGCATTAAGGGACATTCTGCGTGACATCACACCCAATGTGCTTTCTTTTGCACTTGATTTTGACGAAGCCACAAAAATGATTGCGAATGATGTCCATACACTCAGGAGATCTAAAGCCACTGTTGGACGCCCTTTGATTGCTTGGCGATATGTACCTATAAATGTTGTTGAGACACTGAGAACACGTGGGGCCCCCACCCGGATAGTGAGAAAAGTAGCCCGGAACCTGGGCAAGGCCACTTCAGGTGTCCTTGTTGTGCTGGATGTAGTCAACCTTGTGCAAGACTCACTGGACTTGCACAAGGGGGCAAAATCCGAGTCTGCTGAGTCGCTGAGGCAGTGGGCTCAGGAGCTGGAGGAGAATCTCAATGAGCTCACCCATATCCATCAGAGTCTAAAAGCAGGCTAG
Amino sequence
MGSWVQLITSVGVQQNHPGWTVAGQFQEKKRFTEEVIEYFQKKVSPVHLKILLTSDEAWKRFVRVAELPREEADALYEALKNLTPYVAIEDKDMQQKEQQFREWFLKVSSNQMEDSGVHRKASCHCK*D*KGPQRLRHRQCGVWLHWHPVCHWRYVGTIYSRAEPEHYCSWGRAGNSICHGWDRLQHRGEHIHKVSRTHSQQADCNQH*PIGGIKGHSA*HHTQCAFFCT*F*RSHKNDCE*CPYTQEI*SHCWTPFDCLAICTYKCC*DTENTWGPHPDSEKSSPEPGQGHFRCPCCAGCSQPCARLTGLAQGGKIRVC*VAEAVGSGAGGESQ*AHPYPSESKSRL