ENST00000402395.5 SELENOM
Information
- Transcript ID
- ENST00000402395.5
- Genome
- hg19
- Position
- chr22:31,500,758-31,516,055
- Strand
- -
- CDS length
- 438
- Amino acid length
- 146
- Gene symbol
- SELENOM
- Gene type
- protein-coding
- Gene description
- selenoprotein M
- Gene Entrez Gene ID
- 140606
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
7 | 31,500,758 | 31,501,114 |
6 | 31,501,194 | 31,501,272 |
5 | 31,501,644 | 31,501,678 |
4 | 31,501,916 | 31,501,951 |
3 | 31,503,363 | 31,503,519 |
2 | 31,503,670 | 31,503,872 |
1 | 31,515,869 | 31,516,055 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
7 | CDS | 31,500,956 | 31,501,114 |
6 | CDS | 31,501,194 | 31,501,272 |
5 | CDS | 31,501,644 | 31,501,678 |
4 | CDS | 31,501,916 | 31,501,951 |
3 | CDS | 31,503,363 | 31,503,491 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr22 | 31,104,772 | 31,120,069 | Link |
CDS sequence
ATGAGCCTCCTGTTGCCTCCGCTGGCGCTGCTGCTGCTTCTCGCGGCGCTTGTGGCCCCAGCCACAGCCGCCACTGCCTACCGGCCGGACTGGAACCGTCTGAGCGGCCTAACCCGCGCCCGGGTAGAGACCTGCGGGGGATGACAGCTGAACCGCCTAAAGGAGGTGAAGGCTTTCGTCACGCAGGACATTCCATTCTATCACAACCTGGTGATGAAACACCTCCCTGGGGCCGACCCTGAGCTCGTGCTGCTGGGCCGCCGCTACGAGGAACTAGAGCGCATCCCACTCAGTGAAATGACCCGCGAAGAGATCAATGCGCTAGTGCAGGAGCTCGGCTTCTACCGCAAGGCGGCGCCCGACGCGCAGGTGCCCCCCGAGTACGTGTGGGCGCCCGCGAAGCCCCCAGAGGAAACTTCGGACCACGCTGACCTGTAG
Amino sequence
MSLLLPPLALLLLLAALVAPATAATAYRPDWNRLSGLTRARVETCGG*QLNRLKEVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELERIPLSEMTREEINALVQELGFYRKAAPDAQVPPEYVWAPAKPPEETSDHADL*