ENST00000404574.5 SMTN

Information
Transcript ID
ENST00000404574.5
Genome
hg19
Position
chr22:31,489,344-31,500,609
Strand
+
CDS length
1,317
Amino acid length
439
Gene symbol
SMTN
Gene type
protein-coding
Gene description
smoothelin
Gene Entrez Gene ID
6525
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 31,489,344 31,489,862
2 31,491,289 31,491,441
3 31,491,520 31,491,595
4 31,493,255 31,493,324
5 31,494,653 31,494,826
6 31,495,048 31,495,165
7 31,495,731 31,495,882
8 31,496,871 31,497,035
9 31,500,302 31,500,609
CDS
Exon number Type Start Stop
1 CDS 31,489,434 31,489,862
2 CDS 31,491,289 31,491,441
3 CDS 31,491,520 31,491,595
4 CDS 31,493,255 31,493,324
5 CDS 31,494,653 31,494,826
6 CDS 31,495,048 31,495,165
7 CDS 31,495,731 31,495,882
8 CDS 31,496,871 31,497,015
Other genome
Genome Chromosome Start End Links
hg38 chr22 31,093,358 31,104,623 Link
CDS sequence
ATGCCGGGGGTACCAGGGCCTGGGCCTGAGCTGGCCGCAGCCCTTGAGGAGCAGTTGGGCCGGGCACTGGAGGAGCTGCGGGCGGTGGCTGAAGCAGGCCGGGTGGCAGTGACCCAGGCAGCCGAGGTAGCTGTAGCCACCGTGGAGCCGGTGGCCCGGGCAGCTGAAGAGCTGCGGGCAGAGAGAGCAGCACTGAGCCGGCGGCTGGATGCACTGAGCAGGCAGGTGGAGGTGCTGAGCCTACGGCTGGGGGTCCCACTTGTGTCCGGCCTTGAGCCTGAGCTGGAGCCCAGCGAGCTGCTCCTGGCTGCCGCCGACCCCGAGGCCCTCTTTCAGGCTGCCGAGGATGCCGGGACCCCCGTGGCCCACCCACCTGCCTTCAGCACCCGCCGCCGCTCCTCCACCGGCACCACCCGCAGCACTAGTCTCATGGAAGCAGAGCCAGCAGAGCCTCTCGCTGCAGCAGTGGAAGCGGCCAATGGGGCTGAGCAGACCCGAGTGAACAAAGCACCAGAAGGGCGGAGCCCTCTGAGCGCTGAGGAGCTGATGACTATTGAGGATGAAGGAGTCTTGGACAAGATGCTGGATCAGAGCACGGACTTTGAAGAGCGGAAGCTCATCCGGGCTGCACTTCGTGAGCTCCGACAAAGGAAGAGAGATGGCAGTGGCAGCACCATGATGCAAACCAAGACCTTCTCCTCTTCCTCCTCATCCAAGAAGATGGGCAGCATCTTCGACCGCGAGGACCAGGCCAGCCCACGGGCCGGCAGCCTGGCGGCGCTCGAGAAACGGCAGGCCGAGAAGAAGAAAGAGCTGATGAAGGCGCAGAGTCTGCCCAAGACCTCAGCCTCCCAGGCGCGCAAGGCCATGATTGAGAAGCTGGAGAAGGAGGGCGCGGCCGGCAGCCCTGGCGGACCCCGCGCAGCCGTGCAGCGATCCACCAGCTTCGGGGTCCCCAACGCCAACAGCATCAAGCAGATGCTGCTGGACTGGTGTCGAGCCAAGACTCGCGGCTACGAGCACGTCGACATCCAGAACTTCTCCTCCAGCTGGAGTGATGGGATGGCCTTCTGTGCCCTGGTGCACAACTTCTTCCCTGAGGCCTTCGACTATGGGCAGCTTAGCCCTCAGAACCGACGCCAGAACTTCGAGGTGGCCTTCTCATCTGCGGAGACCCATGCGGACTGCCCGCAGCTCCTGGATACAGAGGACATGGTGCGGCTTCGAGAGCCTGACTGGAAGTGCGTGTACACGTACATCCAGGAATTCTACCGCTGTCTGGTCCAGAAGGGGCTGGTAAAAACCAAAAAGTCCTAA
Amino sequence
MPGVPGPGPELAAALEEQLGRALEELRAVAEAGRVAVTQAAEVAVATVEPVARAAEELRAERAALSRRLDALSRQVEVLSLRLGVPLVSGLEPELEPSELLLAAADPEALFQAAEDAGTPVAHPPAFSTRRRSSTGTTRSTSLMEAEPAEPLAAAVEAANGAEQTRVNKAPEGRSPLSAEELMTIEDEGVLDKMLDQSTDFEERKLIRAALRELRQRKRDGSGSTMMQTKTFSSSSSSKKMGSIFDREDQASPRAGSLAALEKRQAEKKKELMKAQSLPKTSASQARKAMIEKLEKEGAAGSPGGPRAAVQRSTSFGVPNANSIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCPQLLDTEDMVRLREPDWKCVYTYIQEFYRCLVQKGLVKTKKS*