ENST00000404953.7 CASTOR1

Information
Transcript ID
ENST00000404953.7
Genome
hg19
Position
chr22:30,681,135-30,685,596
Strand
-
CDS length
876
Amino acid length
292
Gene symbol
CASTOR1
Gene type
protein-coding
Gene description
cytosolic arginine sensor for mTORC1 subunit 1
Gene Entrez Gene ID
652968
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 30,681,135 30,681,677
7 30,681,821 30,681,915
6 30,682,005 30,682,087
5 30,682,814 30,682,937
4 30,683,144 30,683,276
3 30,683,362 30,683,549
2 30,684,695 30,684,765
1 30,685,374 30,685,596
CDS
Exon number Type Start Stop
8 CDS 30,681,609 30,681,677
7 CDS 30,681,821 30,681,915
6 CDS 30,682,005 30,682,087
5 CDS 30,682,814 30,682,937
4 CDS 30,683,144 30,683,276
3 CDS 30,683,362 30,683,549
2 CDS 30,684,695 30,684,765
1 CDS 30,685,374 30,685,486
Other genome
Genome Chromosome Start End Links
hg38 chr22 30,285,146 30,289,607 Link
CDS sequence
ATGGAGCTGCACATCCTAGAACACCGGGTGCGGGTGCTGAGCGTCGCCCGTCCCGGTCTCTGGCTCTACACCCACCCGCTCATCAAGCTGCTCTTCCTGCCCCGCCGCAGCCGGTGCAAGTTCTTCAGCCTGACGGAGACCCCTGAGGATTACACGCTTATGGTGGACGAGGAGGGCTTTAAAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATGCTGTCCACTTACCAGACGGACTTCATCCTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCCCCACGGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACACTGGACCCTGAGACGCTTCCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGGTTCCCCAGTGACCTCCTGCTGACCAGCTCCTCGGGGGAGCTGTGGAGGATGGTGCGCATCGGTGGACAGCCCCTGGGCTTTGATGAATGTGGCATCGTGGCACAGATTGCAGGTCCCCTGGCTGCCGCTGACATCTCTGCCTACTACATCAGCACCTTCAACTTCGACCACGCCCTGGTGCCCGAGGACGGTATCGGCAGCGTCATCGAGGTCCTCCAGCGGCGGCAGGAAGGCCTGGCTTCCTGA
Amino sequence
MELHILEHRVRVLSVARPGLWLYTHPLIKLLFLPRRSRCKFFSLTETPEDYTLMVDEEGFKELPPSEFLQVAEATWLVLNVSSHSGAAVQAAGVTKIARSVIAPLAEHHVSVLMLSTYQTDFILVREQDLSVVIHTLAQEFDIYREVGGEPVPVTRDDSSNGFPRTQHGPSPTVHPIQSPQNRFCVLTLDPETLPAIATTLIDVLFYSHRFPSDLLLTSSSGELWRMVRIGGQPLGFDECGIVAQIAGPLAAADISAYYISTFNFDHALVPEDGIGSVIEVLQRRQEGLAS*