ENST00000216121.12 NIPSNAP1
Information
- Transcript ID
- ENST00000216121.12
- Genome
- hg19
- Position
- chr22:29,950,797-29,977,102
- Strand
- -
- CDS length
- 855
- Amino acid length
- 285
- Gene symbol
- NIPSNAP1
- Gene type
- protein-coding
- Gene description
- nipsnap homolog 1
- Gene Entrez Gene ID
- 8508
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 10 | 29,950,797 | 29,951,988 |
| 9 | 29,954,859 | 29,954,942 |
| 8 | 29,956,723 | 29,956,817 |
| 7 | 29,957,160 | 29,957,191 |
| 6 | 29,957,495 | 29,957,635 |
| 5 | 29,957,781 | 29,957,851 |
| 4 | 29,965,182 | 29,965,276 |
| 3 | 29,966,151 | 29,966,196 |
| 2 | 29,966,394 | 29,966,521 |
| 1 | 29,976,974 | 29,977,102 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 10 | CDS | 29,951,924 | 29,951,988 |
| 9 | CDS | 29,954,859 | 29,954,942 |
| 8 | CDS | 29,956,723 | 29,956,817 |
| 7 | CDS | 29,957,160 | 29,957,191 |
| 6 | CDS | 29,957,495 | 29,957,635 |
| 5 | CDS | 29,957,781 | 29,957,851 |
| 4 | CDS | 29,965,182 | 29,965,276 |
| 3 | CDS | 29,966,151 | 29,966,196 |
| 2 | CDS | 29,966,394 | 29,966,521 |
| 1 | CDS | 29,976,974 | 29,977,071 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr22 | 29,554,808 | 29,581,113 | Link |
CDS sequence
ATGGCTCCGCGGCTGTGCAGCATCTCTGTGACGGCGCGGCGGCTGCTGGGGGGCCCGGGGCCTCGCGCTGGGGACGTTGCGTCTGCAGCTGCGGCGCGTTTCTATTCCAAGGACAATGAAGGCAGCTGGTTCCGCTCCCTCTTTGTTCACAAAGTGGATCCCCGGAAGGATGCCCACTCCACCCTGCTGTCCAAGAAGGAAACCAGCAACCTCTATAAGATCCAGTTTCACAATGTAAAGCCTGAATACCTGGATGCCTACAACAGCCTCACGGAGGCTGTGCTGCCCAAGCTTCACCTGGATGAGGACTACCCATGCTCACTCGTGGGCAACTGGAACACGTGGTATGGGGAGCAGGACCAGGCAGTGCACCTGTGGCGATTCTCAGGTGGCTACCCAGCCCTCATGGACTGCATGAACAAGCTCAAAAACAATAAGGAGTACCTGGAGTTCCGAAGGGAGCGGAGCCAGATGCTGCTGTCCAGGAGAAACCAGCTGCTCCTCGAGTTCAGCTTCTGGAATGAGCCACAGCCCAGAATGGGTCCCAACATCTATGAGCTGAGGACATACAAGCTCAAGCCAGGAACCATGATCGAGTGGGGGAACAACTGGGCTCGGGCCATCAAGTACCGGCAGGAGAACCAGGAGGCAGTGGGCGGCTTCTTCTCACAGATAGGAGAGCTCTACGTGGTGCACCATCTCTGGGCCTATAAAGACCTGCAGTCTCGGGAGGAGACTCGAAACGCTGCCTGGAGGAAGAGAGGCTGGGATGAAAATGTCTACTATACAGTCCCCCTGGTGCGACACATGGAGTCTAGGATCATGATCCCCTTGAAGATCTCGCCTCTGCAGTGA
Amino sequence
MAPRLCSISVTARRLLGGPGPRAGDVASAAAARFYSKDNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAVLPKLHLDEDYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERSQMLLSRRNQLLLEFSFWNEPQPRMGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQEAVGGFFSQIGELYVVHHLWAYKDLQSREETRNAAWRKRGWDENVYYTVPLVRHMESRIMIPLKISPLQ*