ENST00000292779.4 CCDC116

Information
Transcript ID
ENST00000292779.4
Genome
hg19
Position
chr22:21,987,049-21,991,618
Strand
+
CDS length
1,842
Amino acid length
614
Gene symbol
CCDC116
Gene type
protein-coding
Gene description
coiled-coil domain containing 116
Gene Entrez Gene ID
164592
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 21,987,049 21,987,116
2 21,987,409 21,987,542
3 21,988,311 21,988,859
4 21,988,974 21,989,555
5 21,990,721 21,991,618
CDS
Exon number Type Start Stop
2 CDS 21,987,471 21,987,542
3 CDS 21,988,311 21,988,859
4 CDS 21,988,974 21,989,555
5 CDS 21,990,721 21,991,359
Other genome
Genome Chromosome Start End Links
hg38 chr22 21,632,760 21,637,329 Link
CDS sequence
ATGGCCAGGTGCCGCCACCACTCGGGTTACCTGGCCGATGACGAGGCCAGCCACTCCATGTGCAGTGCACGGGTGCAGCTGCCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCACACCCACCATCCACATGTGGCAGCTCAGCACTCCAGGGCCAACGCCGAAACAAGAGGCACCCTCAGCCCTTTGGCCACTTTCTGGATTTCCTAACTGAGAGCCAGGTCCTGGACAGCCTGGAGACAGTGGTGGAGAAGGCGACTGAGCGCATGGCTGCCATGAAGACGGAGGCTGGGGTGCCGCTTGTGGAGGTGCAGGACCCAGTGGAGGTGCCAAGTGGTGGACGGCGGGCACATGCCCGGCCCAGCCTCAGCACCGTACACCGGCACCGTGTACGGCCGACCCTCTGCACTGGACACCCCAACAACTACCCATCCAGCTCCAGCTCCATGTCCAACTGCCATAGCAGCCTCATGGCCGGCTGTCTGGGCTCCCACAGCCGGGACAGTGACCTAGGTGCCCAAGGCTCATTGCCACCTGTGAGGGACAAACTCCTGCTGGAGAAGAACCTCAAGCGGCTGCTACAGCTGGAGAGGGAAGGGAAAGGCCTCAGTCAGTCCTGCTCCCAGAGGGACTCCCTGCTGTGGGATTCGCTGGGTAGCCAGACCAGCTTTCAGTGGACACAGGAGCAGCCCTTGTCCTGGTTCTCAGGGCTGCTGGGCTCAAGCTCTGGCGTGCCTGAAGCATCAGAGCCGAGGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTCATTACTGAGCCAGCTGGAGTCCCTCGACCTGCCTGGCTACTGTCCGCTCCGTGAGCCCCATCGCACGCTGAACTTCCTGGCTGACCACCGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCAGGCTGTGGATAAGCTCCGTGGCGCCCACTGCCGCGACGGCCGTCCTCTGTTCCCCACCAGCTTGGAGCCCACCTCAGATCTGCCGCCTCTGGGCTCTGAGCCAGCTAAACCCACCAATGGCGGGCAGCCCTATGCTTCCCCCCGCCCCACAGTCTCCAGCCCCAAGATGCTTCAGAGAAAACGCAAGGACAGAGGAGGCTCCCCCTCCATGTCTAGTGCCCAGGTGGCCACCAGATTCAAACTCAAGAGCCCCTGCAGCAGCAGCAGGTTCACGAAGAAGAAGCCGCTGCCCTCCATCTCGTCGAAGTCCAGCATGTCTCACTTCTCCAACCGCCTTTATGAGGAGCTCGCCGACTTCCTGACCCAGCAGGCAGCCTCCTTGGTCATCCGCAAGTACGAGTTCGAAAAGGACCTCAGTAAGCAGCTGGGCTTCTTCTCCTTCCCCATCACCCACGTGCTCAGGGACCTTTCCCTGGGCTTAAAGAAGGTAAAAGGCTCCCGCATCCACCTGTCCTCGGAGACCCACCGGAGCTGCCTGCTGCGTAAACTGGAGGAGTCCAAAAGGGCCCGGCAGGCCTCCCGGCTCAGCACCTCCCACTGCAGCACAGAGACACCCTCTGTGCAGCAGGAACCAGCCACCCACACTGCCCAGGACCAGGCCACAGAGCCCTGCCGCTCCCTCTACACCAACTTGCCAGCCAGCCGGCAGCTCAGCCCTTTGGAGCCCAAGCTCTACATGTCTGCCTGCACCGGCATGGGTTCCAGTCCCCCCAAGTCCAAGGACATGGACAATGAGGGCCGTGATAAAGCCGAGATTGAAGATGAAGATGAGGATGAGTTCAAGGATGAAGACCAGGATGAGGACAAGGATGAGGATGGAGTCTAG
Amino sequence
MARCRHHSGYLADDEASHSMCSARVQLPKKPLVPEMRPACKPGRVPHPPSTCGSSALQGQRRNKRHPQPFGHFLDFLTESQVLDSLETVVEKATERMAAMKTEAGVPLVEVQDPVEVPSGGRRAHARPSLSTVHRHRVRPTLCTGHPNNYPSSSSSMSNCHSSLMAGCLGSHSRDSDLGAQGSLPPVRDKLLLEKNLKRLLQLEREGKGLSQSCSQRDSLLWDSLGSQTSFQWTQEQPLSWFSGLLGSSSGVPEASEPRPGEQEPIFRKREFNKEIKSLLSQLESLDLPGYCPLREPHRTLNFLADHRLFPALQSVVSQAVDKLRGAHCRDGRPLFPTSLEPTSDLPPLGSEPAKPTNGGQPYASPRPTVSSPKMLQRKRKDRGGSPSMSSAQVATRFKLKSPCSSSRFTKKKPLPSISSKSSMSHFSNRLYEELADFLTQQAASLVIRKYEFEKDLSKQLGFFSFPITHVLRDLSLGLKKVKGSRIHLSSETHRSCLLRKLEESKRARQASRLSTSHCSTETPSVQQEPATHTAQDQATEPCRSLYTNLPASRQLSPLEPKLYMSACTGMGSSPPKSKDMDNEGRDKAEIEDEDEDEFKDEDQDEDKDEDGV*